An LLM-based Knowledge Synthesis and Scientific Reasoning Framework for Biomedical Discovery
Fuente:
arXiv
Saved in:
| Main Authors: | Wysocki, Oskar, Wysocka, Magdalena, Carvalho, Danilo, Bogatu, Alex Teodor, Gusicuma, Danilo Miranda, Delmas, Maxime, Unsworth, Harriet, Freitas, Andre |
|---|---|
| Format: | Preprint |
| Published: |
2024
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
Accelerating Antibiotic Discovery with Large Language Models and Knowledge Graphs
by: Delmas, Maxime, et al.
Published: (2025)
by: Delmas, Maxime, et al.
Published: (2025)
Biomedical reasoning in action: Multi-agent System for Auditable Biomedical Evidence Synthesis
by: Wysocki, Oskar, et al.
Published: (2025)
by: Wysocki, Oskar, et al.
Published: (2025)
SylloBio-NLI: Evaluating Large Language Models on Biomedical Syllogistic Reasoning
by: Wysocka, Magdalena, et al.
Published: (2024)
by: Wysocka, Magdalena, et al.
Published: (2024)
Controlled LLM-based Reasoning for Clinical Trial Retrieval
by: Jullien, Mael, et al.
Published: (2024)
by: Jullien, Mael, et al.
Published: (2024)
Large Language Models, scientific knowledge and factuality: A framework to streamline human expert evaluation
by: Wysocka, Magdalena, et al.
Published: (2023)
by: Wysocka, Magdalena, et al.
Published: (2023)
LangVAE and LangSpace: Building and Probing for Language Model VAEs
by: Carvalho, Danilo S., et al.
Published: (2025)
by: Carvalho, Danilo S., et al.
Published: (2025)
Deciphering Scientific Collaboration in Biomedical LLM Research: Dynamics, Institutional Participation, and Resource Disparities
by: Li, Lingyao, et al.
Published: (2025)
by: Li, Lingyao, et al.
Published: (2025)
Knowledge-Driven Agentic Scientific Corpus Distillation Framework for Biomedical Large Language Models Training
by: Xiao, Meng, et al.
Published: (2025)
by: Xiao, Meng, et al.
Published: (2025)
Data-driven Discovery of Digital Twins in Biomedical Research
by: Métayer, Clémence, et al.
Published: (2025)
by: Métayer, Clémence, et al.
Published: (2025)
Improving Biomedical Knowledge Graph Quality: A Community Approach
by: Cortes, Katherina G, et al.
Published: (2025)
by: Cortes, Katherina G, et al.
Published: (2025)
Mamba-SSM with LLM Reasoning for Feature Selection: Faithfulness-Aware Biomarker Discovery
by: Balan, Pushpa Kumar, et al.
Published: (2026)
by: Balan, Pushpa Kumar, et al.
Published: (2026)
Domain Knowledge Infused Conditional Generative Models for Accelerating Drug Discovery
by: Hu, Bing, et al.
Published: (2025)
by: Hu, Bing, et al.
Published: (2025)
BioVERSE: Representation Alignment of Biomedical Modalities to LLMs for Multi-Modal Reasoning
by: Tsou, Ching-Huei, et al.
Published: (2025)
by: Tsou, Ching-Huei, et al.
Published: (2025)
PubTator 3.0: an AI-powered Literature Resource for Unlocking Biomedical Knowledge
by: Wei, Chih-Hsuan, et al.
Published: (2024)
by: Wei, Chih-Hsuan, et al.
Published: (2024)
EEG-GPT: Exploring Capabilities of Large Language Models for EEG Classification and Interpretation
by: Kim, Jonathan W., et al.
Published: (2024)
by: Kim, Jonathan W., et al.
Published: (2024)
Virtual Cells: From Conceptual Frameworks to Biomedical Applications
by: Bhardwaj, Saurabh, et al.
Published: (2025)
by: Bhardwaj, Saurabh, et al.
Published: (2025)
A Platform for the Biomedical Application of Large Language Models
by: Lobentanzer, Sebastian, et al.
Published: (2023)
by: Lobentanzer, Sebastian, et al.
Published: (2023)
Addressing ecological challenges from a quantum computing perspective
by: Clenet, Maxime, et al.
Published: (2025)
by: Clenet, Maxime, et al.
Published: (2025)
The Role of Graph Topology in the Performance of Biomedical Knowledge Graph Completion Models
by: Cattaneo, Alberto, et al.
Published: (2024)
by: Cattaneo, Alberto, et al.
Published: (2024)
Knowledge Graph Extraction from Biomedical Literature for Alkaptonuria Rare Disease
by: Pham, Giang, et al.
Published: (2026)
by: Pham, Giang, et al.
Published: (2026)
Accelerating Causal Network Discovery of Alzheimer Disease Biomarkers via Scientific Literature-based Retrieval Augmented Generation
by: Zhou, Xiaofan, et al.
Published: (2025)
by: Zhou, Xiaofan, et al.
Published: (2025)
MCPmed: A Call for MCP-Enabled Bioinformatics Web Services for LLM-Driven Discovery
by: Flotho, Matthias, et al.
Published: (2025)
by: Flotho, Matthias, et al.
Published: (2025)
Improving Molecule Generation and Drug Discovery with a Knowledge-enhanced Generative Model
by: Malusare, Aditya, et al.
Published: (2024)
by: Malusare, Aditya, et al.
Published: (2024)
Physics-Informed Neural Networks can accurately model cardiac electrophysiology in 3D geometries and fibrillatory conditions
by: Chiu, Ching-En, et al.
Published: (2024)
by: Chiu, Ching-En, et al.
Published: (2024)
Bioregionalization analyses with the bioregion R-package
by: Denelle, Pierre, et al.
Published: (2024)
by: Denelle, Pierre, et al.
Published: (2024)
Towards Quantum Tensor Decomposition in Biomedical Applications
by: Burch, Myson, et al.
Published: (2025)
by: Burch, Myson, et al.
Published: (2025)
Implication of modelling choices on connectivity estimation: A comparative analysis
by: Soret, Marie, et al.
Published: (2024)
by: Soret, Marie, et al.
Published: (2024)
Enhancing Clinical Data Warehouses with Provenance and Large File Management: The gitOmmix Approach for Clinical Omics Data
by: Wack, Maxime, et al.
Published: (2024)
by: Wack, Maxime, et al.
Published: (2024)
DeepRetro: Retrosynthetic Pathway Discovery using Iterative LLM Reasoning
by: Sathyanarayana, Shreyas Vinaya, et al.
Published: (2025)
by: Sathyanarayana, Shreyas Vinaya, et al.
Published: (2025)
Closing the Domain Gap in Biomedical Imaging by In-Context Control Samples
by: Sanchez-Fernandez, Ana, et al.
Published: (2026)
by: Sanchez-Fernandez, Ana, et al.
Published: (2026)
Attention-based ROI Discovery in 3D Tissue Images
by: Fathollahian, Hossein, et al.
Published: (2025)
by: Fathollahian, Hossein, et al.
Published: (2025)
Mathematical Discovery of Potential Therapeutic Targets: Application to Rare Melanomas
by: Aghaee, Mahya, et al.
Published: (2025)
by: Aghaee, Mahya, et al.
Published: (2025)
AOT*: Efficient Synthesis Planning via LLM-Empowered AND-OR Tree Search
by: Song, Xiaozhuang, et al.
Published: (2025)
by: Song, Xiaozhuang, et al.
Published: (2025)
Predicting Biomedical Interactions with Probabilistic Model Selection for Graph Neural Networks
by: KC, Kishan, et al.
Published: (2022)
by: KC, Kishan, et al.
Published: (2022)
Accelerating Discovery of Novel and Bioactive Ligands With Pharmacophore-Informed Generative Models
by: Xie, Weixin, et al.
Published: (2024)
by: Xie, Weixin, et al.
Published: (2024)
WGTDA: A Topological Perspective to Biomarker Discovery in Gene Expression Data
by: Nyase, Ndivhuwo, et al.
Published: (2024)
by: Nyase, Ndivhuwo, et al.
Published: (2024)
LINKER: Learning Interactions Between Functional Groups and Residues With Chemical Knowledge-Enhanced Reasoning and Explainability
by: Pham, Phuc, et al.
Published: (2025)
by: Pham, Phuc, et al.
Published: (2025)
Causal Representation Learning from Multimodal Biomedical Observations
by: Sun, Yuewen, et al.
Published: (2024)
by: Sun, Yuewen, et al.
Published: (2024)
TriAgent: Automated Biomarker Discovery with Deep Research Grounding for Triage in Acute Care by LLM-Based Multi-Agent Collaboration
by: Delikoyun, Kerem, et al.
Published: (2025)
by: Delikoyun, Kerem, et al.
Published: (2025)
ORCA: A Comprehensive AI-Driven Platform for Digital Pathology Analysis and Biomarker Discovery
by: Shaker, Noor, et al.
Published: (2025)
by: Shaker, Noor, et al.
Published: (2025)
Similar Items
-
Accelerating Antibiotic Discovery with Large Language Models and Knowledge Graphs
by: Delmas, Maxime, et al.
Published: (2025) -
Biomedical reasoning in action: Multi-agent System for Auditable Biomedical Evidence Synthesis
by: Wysocki, Oskar, et al.
Published: (2025) -
SylloBio-NLI: Evaluating Large Language Models on Biomedical Syllogistic Reasoning
by: Wysocka, Magdalena, et al.
Published: (2024) -
Controlled LLM-based Reasoning for Clinical Trial Retrieval
by: Jullien, Mael, et al.
Published: (2024) -
Large Language Models, scientific knowledge and factuality: A framework to streamline human expert evaluation
by: Wysocka, Magdalena, et al.
Published: (2023)