cryoSPHERE: Single-particle heterogeneous reconstruction from cryo EM
Fuente:
arXiv
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| Main Authors: | Ducrocq, Gabriel, Grunewald, Lukas, Westenhoff, Sebastian, Lindsten, Fredrik |
|---|---|
| Format: | Preprint |
| Published: |
2024
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| Subjects: | |
| Online Access: | |
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