Scikit-fingerprints: easy and efficient computation of molecular fingerprints in Python

Fuente: arXiv
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Autori principali: Adamczyk, Jakub, Ludynia, Piotr
Natura: Preprint
Pubblicazione: 2024
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author Adamczyk, Jakub
Ludynia, Piotr
author_facet Adamczyk, Jakub
Ludynia, Piotr
contents In this work, we present scikit-fingerprints, a Python package for computation of molecular fingerprints for applications in chemoinformatics. Our library offers an industry-standard scikit-learn interface, allowing intuitive usage and easy integration with machine learning pipelines. It is also highly optimized, featuring parallel computation that enables efficient processing of large molecular datasets. Currently, scikit-fingerprints stands as the most feature-rich library in the open source Python ecosystem, offering over 30 molecular fingerprints. Our library simplifies chemoinformatics tasks based on molecular fingerprints, including molecular property prediction and virtual screening. It is also flexible, highly efficient, and fully open source.
format Preprint
id arxiv_https___arxiv_org_abs_2407_13291
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Scikit-fingerprints: easy and efficient computation of molecular fingerprints in Python
Adamczyk, Jakub
Ludynia, Piotr
Software Engineering
Machine Learning
In this work, we present scikit-fingerprints, a Python package for computation of molecular fingerprints for applications in chemoinformatics. Our library offers an industry-standard scikit-learn interface, allowing intuitive usage and easy integration with machine learning pipelines. It is also highly optimized, featuring parallel computation that enables efficient processing of large molecular datasets. Currently, scikit-fingerprints stands as the most feature-rich library in the open source Python ecosystem, offering over 30 molecular fingerprints. Our library simplifies chemoinformatics tasks based on molecular fingerprints, including molecular property prediction and virtual screening. It is also flexible, highly efficient, and fully open source.
title Scikit-fingerprints: easy and efficient computation of molecular fingerprints in Python
topic Software Engineering
Machine Learning
url https://arxiv.org/abs/2407.13291