relentless: Transparent, reproducible molecular dynamics simulations for optimization
Fuente:
arXiv
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| Main Authors: | Sreenivasan, Adithya N, Petix, C. Levi, Sherman, Zachary M., Howard, Michael P. |
|---|---|
| Format: | Preprint |
| Published: |
2024
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| Subjects: | |
| Online Access: | |
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