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Main Authors: Wu, Chaoyi, Qiu, Pengcheng, Liu, Jinxin, Gu, Hongfei, Li, Na, Zhang, Ya, Wang, Yanfeng, Xie, Weidi
Format: Preprint
Published: 2024
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Online Access:https://arxiv.org/abs/2408.12547
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author Wu, Chaoyi
Qiu, Pengcheng
Liu, Jinxin
Gu, Hongfei
Li, Na
Zhang, Ya
Wang, Yanfeng
Xie, Weidi
author_facet Wu, Chaoyi
Qiu, Pengcheng
Liu, Jinxin
Gu, Hongfei
Li, Na
Zhang, Ya
Wang, Yanfeng
Xie, Weidi
contents In this study, we present MedS-Bench, a comprehensive benchmark designed to evaluate the performance of large language models (LLMs) in clinical contexts. Unlike existing benchmarks that focus on multiple-choice question answering, MedS-Bench spans 11 high-level clinical tasks, including clinical report summarization, treatment recommendations, diagnosis, named entity recognition, and medical concept explanation, among others. We evaluated six leading LLMs, e.g., MEDITRON, Mistral, InternLM 2, Llama 3, GPT-4, and Claude-3.5 using few-shot prompting, and found that even the most sophisticated models struggle with these complex tasks. To address these limitations, we developed MedS-Ins, a large-scale instruction tuning dataset for medicine. MedS-Ins comprises 58 medically oriented language corpora, totaling 13.5 million samples across 122 tasks. To demonstrate the dataset's utility, we conducted a proof-of-concept experiment by performing instruction tuning on a lightweight, open-source medical language model. The resulting model, MMedIns-Llama 3, significantly outperformed existing models across nearly all clinical tasks. To promote further advancements in the application of LLMs to clinical challenges, we have made the MedS-Ins dataset fully accessible and invite the research community to contribute to its expansion.Additionally, we have launched a dynamic leaderboard for MedS-Bench, which we plan to regularly update the test set to track progress and enhance the adaptation of general LLMs to the medical domain. Leaderboard: https://henrychur.github.io/MedS-Bench/. Github: https://github.com/MAGIC-AI4Med/MedS-Ins.
format Preprint
id arxiv_https___arxiv_org_abs_2408_12547
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Towards Evaluating and Building Versatile Large Language Models for Medicine
Wu, Chaoyi
Qiu, Pengcheng
Liu, Jinxin
Gu, Hongfei
Li, Na
Zhang, Ya
Wang, Yanfeng
Xie, Weidi
Computation and Language
In this study, we present MedS-Bench, a comprehensive benchmark designed to evaluate the performance of large language models (LLMs) in clinical contexts. Unlike existing benchmarks that focus on multiple-choice question answering, MedS-Bench spans 11 high-level clinical tasks, including clinical report summarization, treatment recommendations, diagnosis, named entity recognition, and medical concept explanation, among others. We evaluated six leading LLMs, e.g., MEDITRON, Mistral, InternLM 2, Llama 3, GPT-4, and Claude-3.5 using few-shot prompting, and found that even the most sophisticated models struggle with these complex tasks. To address these limitations, we developed MedS-Ins, a large-scale instruction tuning dataset for medicine. MedS-Ins comprises 58 medically oriented language corpora, totaling 13.5 million samples across 122 tasks. To demonstrate the dataset's utility, we conducted a proof-of-concept experiment by performing instruction tuning on a lightweight, open-source medical language model. The resulting model, MMedIns-Llama 3, significantly outperformed existing models across nearly all clinical tasks. To promote further advancements in the application of LLMs to clinical challenges, we have made the MedS-Ins dataset fully accessible and invite the research community to contribute to its expansion.Additionally, we have launched a dynamic leaderboard for MedS-Bench, which we plan to regularly update the test set to track progress and enhance the adaptation of general LLMs to the medical domain. Leaderboard: https://henrychur.github.io/MedS-Bench/. Github: https://github.com/MAGIC-AI4Med/MedS-Ins.
title Towards Evaluating and Building Versatile Large Language Models for Medicine
topic Computation and Language
url https://arxiv.org/abs/2408.12547