Cover Image

Reaction Coordinates are Optimal Channels of Energy Flow

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Ma, Ao, Li, Huiyu
Format:	Preprint
Published:	2024
Subjects:	Biological Physics Chemical Physics
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Enhanced Sampling of Protein Conformational Changes via True Reaction Coordinates from Energy Relaxation
by: Li, Huiyu, et al.
Published: (2024)

Cooperative and Inhibitory Ion Transport in Functionalized Angstrom-Scale Two-Dimensional Channels
by: Wang, Mingzhan, et al.
Published: (2024)

General Quantum Alchemical Free Energy Simulations via Hamiltonian Interpolation
by: Li, Chenghan, et al.
Published: (2024)

Quantum Jump Approach for Photosynthetic Energy Transfer with Chemical Reaction and Fluorescence Loss
by: Li, Rui, et al.
Published: (2025)

Tripeptide-Dynamics from Empirical and Machine-Learned Energy Functions
by: Aydin, Sena, et al.
Published: (2025)

Collective Variable-Guided Engineering of the Free-Energy Surface of a Small Peptide
by: Medaparambath, Muralika, et al.
Published: (2026)

Transitions and Thermodynamics on Species Graphs of Chemical Reaction Networks
by: Sugie, Keisuke, et al.
Published: (2024)

Frequency-Dependent Vibronic Effects in Steady State Energy Transport
by: Calderón, Leonardo F., et al.
Published: (2024)

Predictive Free Energy Simulations Through Hierarchical Distillation of Quantum Hamiltonians
by: Li, Chenghan, et al.
Published: (2025)

Dynamic Response of Ionic Current in Conical Nanopores
by: Liu, Zhe, et al.
Published: (2024)

Breaking the Timescale Barrier: Generative Discovery of Conformational Free-Energy Landscapes and Transition Pathways
by: Tang, Chenyu, et al.
Published: (2025)

Optimal information gain at the onset of habituation to repeated stimuli
by: Nicoletti, Giorgio, et al.
Published: (2023)

Accurate QM/MM Molecular Dynamics for Periodic Systems in \textsc{GPU4PySCF} with Applications to Enzyme Catalysis
by: Li, Chenghan, et al.
Published: (2024)

Ergotropy of a Photosynthetic Reaction Center
by: Kalita, Trishna, et al.
Published: (2025)

Recent advances on the spherical metal oxides for sustainable degradation of antibiotics
by: Zhu, Ke, et al.
Published: (2024)

A Hybrid Quantum Computing Pipeline for Real World Drug Discovery
by: Li, Weitang, et al.
Published: (2024)

Temperature-Enhanced Coercive Field by Chiral Molecules
by: Kapon, Yael, et al.
Published: (2024)

Multiscale Biomolecular Simulations in the Exascale Era
by: Carrasco-Busturia, David, et al.
Published: (2024)

A Fluorescent Ratiometric Potassium Sensor Based on IPG4-Silica Microparticles for Selective Detection and Fluorescence Imaging of Potassium Cations
by: Colella, Francesco, et al.
Published: (2024)

Light-Matter Interactions in Photosynthetic Protein Attached to solids and Nanostructures
by: Carmeli, Itai, et al.
Published: (2024)

Automated optimization of force field parameters against ensemble-averaged measurements with Bayesian Inference of Conformational Populations
by: Raddi, Robert M., et al.
Published: (2024)

Messenger size optimality in cellular communications
by: Tirandaz, Arash, et al.
Published: (2024)

Non-toxic fabrication of fluorescent carbon nanoparticles from medicinal plants/sources with their antioxidant assay
by: Singh, Parul, et al.
Published: (2024)

In vitro degradation and cytotoxicity response of biobased nanoparticle prepared by thiol-ene polymerization in miniemulsion
by: Hoelscher, Fernanda, et al.
Published: (2024)

Controlling the biodegradation rates of poly(globalide-co-ε-caprolactone) copolymers by post polymerization modification
by: Guindani, Camila, et al.
Published: (2024)

Singlet fission contributes to solar energy harvesting in photosynthesis
by: Wang, Shuangqing, et al.
Published: (2024)

Learning data efficient coarse-grained molecular dynamics from forces and noise
by: Durumeric, Aleksander E. P., et al.
Published: (2024)

Meta-creatures: Developing an omnipotent hydrogel cell to construct bio-inspired systems
by: Dai, Hanqing, et al.
Published: (2024)

Liquid-liquid phase separation of proteins is modulated by amino acids in vitro and in vivo by regulating protein-protein interactions
by: Xu, Xufeng, et al.
Published: (2024)

On the Origins of Life's Homochirality: Inducing Enantiomeric Excess with Spin-Polarized Electrons
by: Ozturk, S. Furkan, et al.
Published: (2022)

Molecular dynamics simulation analysis of structural dynamic cross correlation induced by odorant hydrogen-bonding in mouse eugenol olfactory receptor
by: Okamoto, Chisato, et al.
Published: (2023)

Roles of pigment arrangement in light-harvesting phycobiliproteins revealed by recombinant techniques combined with two-dimensional electronic spectroscopy
by: Tsubouchi, Masaaki, et al.
Published: (2026)

Is There Elliptic Distortion in the Light Harvesting Complex 2 of Purple Bacteria?
by: Jang, Seogjoo J., et al.
Published: (2026)

Statistical method for analysis of interactions between chosen protein and chondroitin sulfate in an aqueous environment
by: Weber, Piotr, et al.
Published: (2022)

Quantum-Accurate Conformational Stabilities and Vibrational Dynamics in Molecules and Proteins with Machine-Learned Force Fields
by: Suárez-Dou, Sergio, et al.
Published: (2026)

The central dogma of biological homochirality: How does chiral information propagate in a prebiotic network?
by: Ozturk, S. Furkan, et al.
Published: (2023)

Dependence of energy relaxation and vibrational coherence on the location of light-harvesting chromoproteins in photosynthetic antenna protein complexes
by: Tsubouchi, Masaaki, et al.
Published: (2025)

A mesoscale model for quantitative phospholipid monolayer simulations at the air-water interface
by: Zhu, Yongzheng, et al.
Published: (2021)

Spin-Dependent Amyloid Self-Assembly on Magnetic Substrates
by: Kapon, Yael, et al.
Published: (2025)

Emamectin benzoate sensing using vivianenes (2D vivianites)
by: Slathia, Surbhi, et al.
Published: (2025)