Rotationally invariant local bond order parameters for accurate determination of hydrate structures
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| Format: | Preprint |
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2024
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| _version_ | 1866914931979321344 |
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| author | Zerón, Iván M. Algaba, Jesús Míguez, José Manuel Mendiboure, Bruno Blas, Felipe J. |
| author_facet | Zerón, Iván M. Algaba, Jesús Míguez, José Manuel Mendiboure, Bruno Blas, Felipe J. |
| contents | Averaged local bond order parameters based on spherical harmonics, also known as Lechner and Dellago order parameters, are routinely used to determine crystal structures in molecular simulations. Among different options, the combination of the $\overline{q}_{4}$ and $\overline{q}_{6}$ parameters is one of the best choices in the literature since allows one to distinguish, not only between solid- and liquid-like particles but also between different crystallographic phases, including cubic and hexagonal phases. Recently, Algaba et al. [J. Colloid Interface Sci. 623, 354, (2022)] have used the Lechner and Dellago order parameters to distinguish hydrate- and liquid-like water molecules in the context of determining the carbon dioxide hydrate-water interfacial free energy. According to the results, the preferred combination previously mentioned is not the best option to differentiate between hydrate- and liquid-like water molecules. In this work, we revisit and extend the use of these parameters to deal with systems in which clathrate hydrates phases coexist with liquid phases of water. We consider carbon dioxide, methane, tetrahydrofuran, nitrogen, and hydrogen hydrates that exhibit sI and sII crystallographic structures. We find that the $\overline{q}_{3}$ and $\overline{q}_{12}$ combination is the best option possible between a large number of possible different pairs to distinguish between hydrate- and liquid-like water molecules in all cases. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2409_00508 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Rotationally invariant local bond order parameters for accurate determination of hydrate structures Zerón, Iván M. Algaba, Jesús Míguez, José Manuel Mendiboure, Bruno Blas, Felipe J. Soft Condensed Matter Averaged local bond order parameters based on spherical harmonics, also known as Lechner and Dellago order parameters, are routinely used to determine crystal structures in molecular simulations. Among different options, the combination of the $\overline{q}_{4}$ and $\overline{q}_{6}$ parameters is one of the best choices in the literature since allows one to distinguish, not only between solid- and liquid-like particles but also between different crystallographic phases, including cubic and hexagonal phases. Recently, Algaba et al. [J. Colloid Interface Sci. 623, 354, (2022)] have used the Lechner and Dellago order parameters to distinguish hydrate- and liquid-like water molecules in the context of determining the carbon dioxide hydrate-water interfacial free energy. According to the results, the preferred combination previously mentioned is not the best option to differentiate between hydrate- and liquid-like water molecules. In this work, we revisit and extend the use of these parameters to deal with systems in which clathrate hydrates phases coexist with liquid phases of water. We consider carbon dioxide, methane, tetrahydrofuran, nitrogen, and hydrogen hydrates that exhibit sI and sII crystallographic structures. We find that the $\overline{q}_{3}$ and $\overline{q}_{12}$ combination is the best option possible between a large number of possible different pairs to distinguish between hydrate- and liquid-like water molecules in all cases. |
| title | Rotationally invariant local bond order parameters for accurate determination of hydrate structures |
| topic | Soft Condensed Matter |
| url | https://arxiv.org/abs/2409.00508 |