A Modular and Extensible CHARMM-Compatible Model for All-Atom Simulation of Polypeptoids
Fuente:
arXiv
Guardado en:
| Autores principales: | Berlaga, Alex, Torkelson, Kaylyn, Seal, Aniruddha, Pfaendtner, Jim, Ferguson, Andrew L. |
|---|---|
| Formato: | Preprint |
| Publicado: |
2024
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| Materias: | |
| Acceso en línea: | |
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