Mechanistic-statistical model for the expansion of ash dieback
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arXiv
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| Autores principales: | , , , |
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| Formato: | Preprint |
| Publicado: |
2024
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| _version_ | 1866917772292784128 |
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| author | Fritsch, Coralie Grosdidier, Marie Gégout-Petit, Anne Marçais, Benoit |
| author_facet | Fritsch, Coralie Grosdidier, Marie Gégout-Petit, Anne Marçais, Benoit |
| contents | Hymenoscyphus fraxineus is an invasive forest fungal pathogen that induces severe dieback in European ash populations. The spread of the disease has been closely monitored in France by the forest health survey system. We have developed a mechanisticstatistical model that describes the spread of the disease. It takes into account climate (summer temperature and spring rainfall), pathogen population dynamics (foliar infection, Allee effect induced by limited sexual partner encounters) and host density. We fitted this model using available disease reports. We estimated the parameters of our model, first identifying the appropriate ranges for the parameters, which led to a model reduction, and then using an adaptive multiple importance sampling algorithm for fitting. The model reproduces well the propagation observed in France over the last 20 years. In particular, it predicts the absence of disease impact in the south-east of the country and its weak development in the Garonne valley in south-west France. Summer temperature is the factor with the highest overall effect on disease spread, and explains the limited impact in southern France. Among the different temperature indices tested, the number of summer days with temperatures above 28{\textdegree}C gave the best qualitative behavior and the best fit. In contrast, the Allee effect and the heterogeneity of spring precipitation did not strongly affect the overall expansion of H. fraxineus in France and could be neglected in the modeling process. The model can be used to infer the average annual dispersal of H. fraxineus in France. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2409_06273 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Mechanistic-statistical model for the expansion of ash dieback Fritsch, Coralie Grosdidier, Marie Gégout-Petit, Anne Marçais, Benoit Populations and Evolution Applications Hymenoscyphus fraxineus is an invasive forest fungal pathogen that induces severe dieback in European ash populations. The spread of the disease has been closely monitored in France by the forest health survey system. We have developed a mechanisticstatistical model that describes the spread of the disease. It takes into account climate (summer temperature and spring rainfall), pathogen population dynamics (foliar infection, Allee effect induced by limited sexual partner encounters) and host density. We fitted this model using available disease reports. We estimated the parameters of our model, first identifying the appropriate ranges for the parameters, which led to a model reduction, and then using an adaptive multiple importance sampling algorithm for fitting. The model reproduces well the propagation observed in France over the last 20 years. In particular, it predicts the absence of disease impact in the south-east of the country and its weak development in the Garonne valley in south-west France. Summer temperature is the factor with the highest overall effect on disease spread, and explains the limited impact in southern France. Among the different temperature indices tested, the number of summer days with temperatures above 28{\textdegree}C gave the best qualitative behavior and the best fit. In contrast, the Allee effect and the heterogeneity of spring precipitation did not strongly affect the overall expansion of H. fraxineus in France and could be neglected in the modeling process. The model can be used to infer the average annual dispersal of H. fraxineus in France. |
| title | Mechanistic-statistical model for the expansion of ash dieback |
| topic | Populations and Evolution Applications |
| url | https://arxiv.org/abs/2409.06273 |