k-mer-based approaches to bridging pangenomics and population genetics
Fuente:
arXiv
Guardado en:
| Autores principales: | Roberts, Miles D., Davis, Olivia, Josephs, Emily B., Williamson, Robert J. |
|---|---|
| Formato: | Preprint |
| Publicado: |
2024
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| Materias: | |
| Acceso en línea: | |
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