Rotation-Beating dynamics of a driven flexible filament: role of motor protein properties
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arXiv
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| Format: | Preprint |
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2024
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| _version_ | 1866912035073163264 |
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| author | Khosravanizadeh, Amir Dmitrieff, Serge |
| author_facet | Khosravanizadeh, Amir Dmitrieff, Serge |
| contents | We have used numerical simulations to investigate how the properties of motor proteins control the dynamical behavior of a driven flexible filament. The filament is pinned at one end and positioned on top of a patch of anchored motor proteins, a setup commonly referred to as a spiral gliding assay. In nature, there is a variety of motor proteins with different properties. In this study, we have investigated the role of detachment rate, detachment force, stall force, and unloaded speed of motors on the dynamical behavior of the filament. We found that this system generally can show three different regimes: 1) Fluctuation, where the filament undergoes random fluctuations because the motors are unable to bend it. 2) Rotation, in which the filament bends and then moves continuously in one direction. 3) Beating, where the filament's direction of rotation changes over time. We found that the transition between fluctuation and rotation occurs when motors exert a force sufficient to buckle the filament. The threshold force coincides to the second buckling mode of a filament undergoing a continuously distributed load. Moreover, we showed that when motors near the pining point work close to their stall force, they get stuck and act as a second pin, leading to the beating regime. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2409_12729 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Rotation-Beating dynamics of a driven flexible filament: role of motor protein properties Khosravanizadeh, Amir Dmitrieff, Serge Soft Condensed Matter Biological Physics 70F40 We have used numerical simulations to investigate how the properties of motor proteins control the dynamical behavior of a driven flexible filament. The filament is pinned at one end and positioned on top of a patch of anchored motor proteins, a setup commonly referred to as a spiral gliding assay. In nature, there is a variety of motor proteins with different properties. In this study, we have investigated the role of detachment rate, detachment force, stall force, and unloaded speed of motors on the dynamical behavior of the filament. We found that this system generally can show three different regimes: 1) Fluctuation, where the filament undergoes random fluctuations because the motors are unable to bend it. 2) Rotation, in which the filament bends and then moves continuously in one direction. 3) Beating, where the filament's direction of rotation changes over time. We found that the transition between fluctuation and rotation occurs when motors exert a force sufficient to buckle the filament. The threshold force coincides to the second buckling mode of a filament undergoing a continuously distributed load. Moreover, we showed that when motors near the pining point work close to their stall force, they get stuck and act as a second pin, leading to the beating regime. |
| title | Rotation-Beating dynamics of a driven flexible filament: role of motor protein properties |
| topic | Soft Condensed Matter Biological Physics 70F40 |
| url | https://arxiv.org/abs/2409.12729 |