Open-Source Periorbital Segmentation Dataset for Ophthalmic Applications

Fuente: arXiv
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Main Authors: Nahass, George R., Koehler, Emma, Tomaras, Nicholas, Lopez, Danny, Cheung, Madison, Palacios, Alexander, Peterson, Jeffrey C., Hubschman, Sasha, Green, Kelsey, Purnell, Chad A., Setabutr, Pete, Tran, Ann Q., Yi, Darvin
Format: Preprint
Published: 2024
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author Nahass, George R.
Koehler, Emma
Tomaras, Nicholas
Lopez, Danny
Cheung, Madison
Palacios, Alexander
Peterson, Jeffrey C.
Hubschman, Sasha
Green, Kelsey
Purnell, Chad A.
Setabutr, Pete
Tran, Ann Q.
Yi, Darvin
author_facet Nahass, George R.
Koehler, Emma
Tomaras, Nicholas
Lopez, Danny
Cheung, Madison
Palacios, Alexander
Peterson, Jeffrey C.
Hubschman, Sasha
Green, Kelsey
Purnell, Chad A.
Setabutr, Pete
Tran, Ann Q.
Yi, Darvin
contents Periorbital segmentation and distance prediction using deep learning allows for the objective quantification of disease state, treatment monitoring, and remote medicine. However, there are currently no reports of segmentation datasets for the purposes of training deep learning models with sub mm accuracy on the regions around the eyes. All images (n=2842) had the iris, sclera, lid, caruncle, and brow segmented by five trained annotators. Here, we validate this dataset through intra and intergrader reliability tests and show the utility of the data in training periorbital segmentation networks. All the annotations are publicly available for free download. Having access to segmentation datasets designed specifically for oculoplastic surgery will permit more rapid development of clinically useful segmentation networks which can be leveraged for periorbital distance prediction and disease classification. In addition to the annotations, we also provide an open-source toolkit for periorbital distance prediction from segmentation masks. The weights of all models have also been open-sourced and are publicly available for use by the community.
format Preprint
id arxiv_https___arxiv_org_abs_2409_20407
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Open-Source Periorbital Segmentation Dataset for Ophthalmic Applications
Nahass, George R.
Koehler, Emma
Tomaras, Nicholas
Lopez, Danny
Cheung, Madison
Palacios, Alexander
Peterson, Jeffrey C.
Hubschman, Sasha
Green, Kelsey
Purnell, Chad A.
Setabutr, Pete
Tran, Ann Q.
Yi, Darvin
Computer Vision and Pattern Recognition
Tissues and Organs
Periorbital segmentation and distance prediction using deep learning allows for the objective quantification of disease state, treatment monitoring, and remote medicine. However, there are currently no reports of segmentation datasets for the purposes of training deep learning models with sub mm accuracy on the regions around the eyes. All images (n=2842) had the iris, sclera, lid, caruncle, and brow segmented by five trained annotators. Here, we validate this dataset through intra and intergrader reliability tests and show the utility of the data in training periorbital segmentation networks. All the annotations are publicly available for free download. Having access to segmentation datasets designed specifically for oculoplastic surgery will permit more rapid development of clinically useful segmentation networks which can be leveraged for periorbital distance prediction and disease classification. In addition to the annotations, we also provide an open-source toolkit for periorbital distance prediction from segmentation masks. The weights of all models have also been open-sourced and are publicly available for use by the community.
title Open-Source Periorbital Segmentation Dataset for Ophthalmic Applications
topic Computer Vision and Pattern Recognition
Tissues and Organs
url https://arxiv.org/abs/2409.20407