Copertina

Knowledge-Driven Feature Selection and Engineering for Genotype Data with Large Language Models

Fuente: arXiv

Salvato in:

Dettagli Bibliografici
Autori principali:	Lee, Joseph, Yang, Shu, Baik, Jae Young, Liu, Xiaoxi, Tan, Zhen, Li, Dawei, Wen, Zixuan, Hou, Bojian, Duong-Tran, Duy, Chen, Tianlong, Shen, Li
Natura:	Preprint
Pubblicazione:	2024
Soggetti:	Machine Learning Computation and Language Genomics
Accesso online:	Acceder al recurso
Tags:	Aggiungi Tag Nessun Tag, puoi essere il primo ad aggiungerne!!

Documenti analoghi

Genotype-to-Phenotype Prediction in Rice with High-Dimensional Nonlinear Features
di: Zhou, Zeyuan, et al.
Pubblicazione: (2025)

Genetic Features for Drug Responses in Cancer -- Investigating an Ensemble-Feature-Selection Approach
di: Schlüter, Johannes, et al.
Pubblicazione: (2025)

Engineering Spatial and Molecular Features from Cellular Niches to Inform Predictions of Inflammatory Bowel Disease
di: Tan, Myles Joshua Toledo, et al.
Pubblicazione: (2025)

LSTM Autoencoder-based Deep Neural Networks for Barley Genotype-to-Phenotype Prediction
di: Wang, Guanjin, et al.
Pubblicazione: (2024)

Learnable Group Transform: Enhancing Genotype-to-Phenotype Prediction for Rice Breeding with Small, Structured Datasets
di: Dong, Yunxuan, et al.
Pubblicazione: (2025)

On the (In)Significance of Feature Selection in High-Dimensional Datasets
di: Neekhra, Bhavesh, et al.
Pubblicazione: (2025)

Exploring the Genetic Potential and Genotype × Environment Interaction of Winter Wheat Genotypes ( Triticum aestivum L.) Under Irrigated and Heat Stress Conditions
di: Binod Panthi, et al.
Pubblicazione: (2025)

DALK: Dynamic Co-Augmentation of LLMs and KG to answer Alzheimer's Disease Questions with Scientific Literature
di: Li, Dawei, et al.
Pubblicazione: (2024)

Multi-omic Causal Discovery using Genotypes and Gene Expression
di: Asiedu, Stephen, et al.
Pubblicazione: (2025)

An AI-powered Knowledge Hub for Potato Functional Genomics
di: Yuxin, Jia, et al.
Pubblicazione: (2025)

Disentangling Genotype and Environment Specific Latent Features for Improved Trait Prediction using a Compositional Autoencoder
di: Powadi, Anirudha, et al.
Pubblicazione: (2024)

Complete genome sequence of Lysinibacillus sp. WB86, a potential antimicrobial lanthipeptides producer.
di: Sun, Huai-Ying, et al.
Pubblicazione: (2025)

Optimization of Whole-Genome Resequencing Depth for High-Throughput SNP Genotyping in .
di: Lin, Pengfei, et al.
Pubblicazione: (2024)

FastDup: a scalable duplicate marking tool using speculation-and-test mechanism
di: Zhang, Zhonghai, et al.
Pubblicazione: (2025)

A Linear-Transformer Hybrid for SNP-Based Genotype-to-Phenotype Prediction in Grapevine
di: Wang, Yibin, et al.
Pubblicazione: (2026)

Leveraging unmanned aerial vehicle derived multispectral data for improved genomic prediction in potato ( Solanum tuberosum )
di: Muyideen Yusuf, et al.
Pubblicazione: (2025)

Chromosome-Level Genome Assembly and Annotation of the Japanese Cutlassfish (Trichiurus japonicus): A High-Quality Genomic Resource Featuring Nuclear and Mitochondrial Completeness for Future Studies.
di: Hsu, Po-Cheng, et al.
Pubblicazione: (2025)

Discovery of a de novo ITPR1 missense mutation in a patient with early‐onset cerebellar ataxia: A rare case report of spinocerebellar ataxia 29
di: Jae In Lee, et al.
Pubblicazione: (2024)

An LLM-Driven Multi-Agent Debate System for Mendelian Diseases
di: Zhou, Xinyang, et al.
Pubblicazione: (2025)

Analysis of Genotypes and Phenotypes in Chinese Patients With Tuberous Sclerosis Complex Harboring Novel Variants of TSC1 and TSC2 Genes
di: Jian Chen, et al.
Pubblicazione: (2025)

Use of 3D chaos game representation to quantify DNA sequence similarity with applications for hierarchical clustering
di: Young, Stephanie, et al.
Pubblicazione: (2024)

Bizard: A Community-Driven Platform for Accelerating and Enhancing Biomedical Data Visualization
di: Li, Kexin, et al.
Pubblicazione: (2025)

SNPgen: Phenotype-Supervised Genotype Representation and Synthetic Data Generation via Latent Diffusion
di: Lampis, Andrea, et al.
Pubblicazione: (2026)

Metadata-guided Feature Disentanglement for Functional Genomics
di: Rakowski, Alexander, et al.
Pubblicazione: (2024)

GenoBERT: A Language Model for Accurate Genotype Imputation
di: Huang, Lei, et al.
Pubblicazione: (2026)

A Multi-Domain Multi-Task Approach for Feature Selection from Bulk RNA Datasets
di: Salta, Karim, et al.
Pubblicazione: (2024)

Chromosome‐level genome of Zoysia sinica in the intertidal zone reveals genomic insights into waterlogging stress adaptation
di: Hyeonseon Park, et al.
Pubblicazione: (2025)

Integrative Pan-Cancer Analysis of RNMT: a Potential Prognostic and Immunological Biomarker
di: Huang, Shuqiang, et al.
Pubblicazione: (2022)

G2DR: A Genotype-First Framework for Genetics-Informed Target Prioritization and Drug Repurposing
di: Muneeb, Muhammad, et al.
Pubblicazione: (2026)

Selecting Differential Splicing Methods: Practical Considerations
di: Draper, Ben J, et al.
Pubblicazione: (2024)

Deep Generative Models for Discrete Genotype Simulation
di: Xie, Sihan, et al.
Pubblicazione: (2025)

A Pan-cancer Classification Model using Multi-view Feature Selection Method and Ensemble Classifier
di: Chowdhury, Tareque Mohmud, et al.
Pubblicazione: (2025)

Emerging Challenges in Molecular Paleontology: Misapplication of Environmental DNA Fragments and Misconception of Deamination as a Key Criterion for In Situ DNA Identification
di: Zhao, Wan-Qian, et al.
Pubblicazione: (2024)

Whole-genome sequence of the lichen-forming fungus Cetrariella delisei reveals an expanded repertoire of biosynthetic gene clusters.
di: Cho, Minjoo, et al.
Pubblicazione: (2025)

Clinical Features and Genetic Characteristics of XLID Patients With KDM5C Gene Mutations: Insights on Phenotype–Genotype Correlations From 175 Previous Cases and Identification of a Novel Variant
di: Mohammad‐Reza Ghasemi, et al.
Pubblicazione: (2025)

GATES: Graph Attention Network with Global Expression Fusion for Deciphering Spatial Transcriptome Architectures
di: Xiao, Xiongtao, et al.
Pubblicazione: (2024)

Accessing the topological properties of human brain functional sub-circuits in Echo State Networks
di: Nguyen, Bach, et al.
Pubblicazione: (2024)

Finding low-complexity DNA sequences with longdust
di: Li, Heng, et al.
Pubblicazione: (2025)

Artificial Intelligence for Central Dogma-Centric Multi-Omics: Challenges and Breakthroughs
di: Xin, Lei, et al.
Pubblicazione: (2024)

Prenatal Diagnosis of Autosomal Recessive Primary Microcephaly Type 2 Caused by Compound Heterozygous WDR62 Variants in a Family With Two Recurrent Cases
di: Yan‐Fang Li, et al.
Pubblicazione: (2026)