U-net based prediction of cerebrospinal fluid distribution and ventricular reflux grading

Fuente: arXiv
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Hauptverfasser: Rieff, Melanie, Holzberger, Fabian, Lapina, Oksana, Ringstad, Geir, Valnes, Lars Magnus, Warsza, Bogna, Mardal, Kent-Andre, Eide, Per Kristian, Wohlmuth, Barbara
Format: Preprint
Veröffentlicht: 2024
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author Rieff, Melanie
Holzberger, Fabian
Lapina, Oksana
Ringstad, Geir
Valnes, Lars Magnus
Warsza, Bogna
Mardal, Kent-Andre
Eide, Per Kristian
Wohlmuth, Barbara
author_facet Rieff, Melanie
Holzberger, Fabian
Lapina, Oksana
Ringstad, Geir
Valnes, Lars Magnus
Warsza, Bogna
Mardal, Kent-Andre
Eide, Per Kristian
Wohlmuth, Barbara
contents Previous work indicates evidence that cerebrospinal fluid (CSF) plays a crucial role in brain waste clearance processes, and that altered flow patterns are associated with various diseases of the central nervous system. In this study, we investigate the potential of deep learning to predict the distribution in human brain of a gadolinium-based CSF contrast agent (tracer) administered intrathecal. For this, T1-weighted magnetic resonance imaging (MRI) scans taken at multiple time points before and after injection were utilized. We propose a U-net-based supervised learning model to predict pixel-wise signal increase at its peak after 24 hours. Performance is evaluated based on different tracer distribution stages provided during training, including predictions from baseline scans taken before injection. Our findings show that training with imaging data from only the first two hours post-injection yields tracer flow predictions comparable to models trained with additional later-stage scans. Validation against ventricular reflux gradings from neuroradiologists confirmed alignment with expert evaluations. These results demonstrate that deep learning-based methods for CSF flow prediction deserve more attention, as minimizing MR imaging without compromising clinical analysis could enhance efficiency, improve patient well-being, and lower healthcare costs.
format Preprint
id arxiv_https___arxiv_org_abs_2410_04460
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle U-net based prediction of cerebrospinal fluid distribution and ventricular reflux grading
Rieff, Melanie
Holzberger, Fabian
Lapina, Oksana
Ringstad, Geir
Valnes, Lars Magnus
Warsza, Bogna
Mardal, Kent-Andre
Eide, Per Kristian
Wohlmuth, Barbara
Image and Video Processing
Computer Vision and Pattern Recognition
Machine Learning
Previous work indicates evidence that cerebrospinal fluid (CSF) plays a crucial role in brain waste clearance processes, and that altered flow patterns are associated with various diseases of the central nervous system. In this study, we investigate the potential of deep learning to predict the distribution in human brain of a gadolinium-based CSF contrast agent (tracer) administered intrathecal. For this, T1-weighted magnetic resonance imaging (MRI) scans taken at multiple time points before and after injection were utilized. We propose a U-net-based supervised learning model to predict pixel-wise signal increase at its peak after 24 hours. Performance is evaluated based on different tracer distribution stages provided during training, including predictions from baseline scans taken before injection. Our findings show that training with imaging data from only the first two hours post-injection yields tracer flow predictions comparable to models trained with additional later-stage scans. Validation against ventricular reflux gradings from neuroradiologists confirmed alignment with expert evaluations. These results demonstrate that deep learning-based methods for CSF flow prediction deserve more attention, as minimizing MR imaging without compromising clinical analysis could enhance efficiency, improve patient well-being, and lower healthcare costs.
title U-net based prediction of cerebrospinal fluid distribution and ventricular reflux grading
topic Image and Video Processing
Computer Vision and Pattern Recognition
Machine Learning
url https://arxiv.org/abs/2410.04460