Precision Cancer Classification and Biomarker Identification from mRNA Gene Expression via Dimensionality Reduction and Explainable AI
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arXiv
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| Main Authors: | Tabassum, Farzana, Islam, Sabrina, Rizwan, Siana, Sobhan, Masrur, Ahmed, Tasnim, Ahmed, Sabbir, Chowdhury, Tareque Mohmud |
|---|---|
| Format: | Preprint |
| Published: |
2024
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| Subjects: | |
| Online Access: | |
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