Boltzmann priors for Implicit Transfer Operators
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arXiv
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| Autores principales: | , , , |
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| Formato: | Preprint |
| Publicado: |
2024
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| _version_ | 1866913772717735936 |
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| author | Diez, Juan Viguera Schreiner, Mathias Engkvist, Ola Olsson, Simon |
| author_facet | Diez, Juan Viguera Schreiner, Mathias Engkvist, Ola Olsson, Simon |
| contents | Accurate prediction of thermodynamic properties is essential in drug discovery and materials science. Molecular dynamics (MD) simulations provide a principled approach to this task, yet they typically rely on prohibitively long sequential simulations. Implicit Transfer Operator (ITO) Learning offers a promising approach to address this limitation by enabling stable simulation with time steps orders of magnitude larger than MD. However, to train ITOs, we need extensive, unbiased MD data, limiting the scope of this framework. Here, we introduce Boltzmann Priors for ITO (BoPITO) to enhance ITO learning in two ways. First, BoPITO enables more efficient data generation, and second, it embeds inductive biases for long-term dynamical behavior, simultaneously improving sample efficiency by one order of magnitude and guaranteeing asymptotically unbiased equilibrium statistics. Furthermore, we showcase the use of BoPITO in a new tunable sampling protocol interpolating between ITOs trained on off-equilibrium simulations and an equilibrium model by incorporating unbiased correlation functions. Code is available at https://github.com/olsson-group/bopito . |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2410_10605 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Boltzmann priors for Implicit Transfer Operators Diez, Juan Viguera Schreiner, Mathias Engkvist, Ola Olsson, Simon Chemical Physics Accurate prediction of thermodynamic properties is essential in drug discovery and materials science. Molecular dynamics (MD) simulations provide a principled approach to this task, yet they typically rely on prohibitively long sequential simulations. Implicit Transfer Operator (ITO) Learning offers a promising approach to address this limitation by enabling stable simulation with time steps orders of magnitude larger than MD. However, to train ITOs, we need extensive, unbiased MD data, limiting the scope of this framework. Here, we introduce Boltzmann Priors for ITO (BoPITO) to enhance ITO learning in two ways. First, BoPITO enables more efficient data generation, and second, it embeds inductive biases for long-term dynamical behavior, simultaneously improving sample efficiency by one order of magnitude and guaranteeing asymptotically unbiased equilibrium statistics. Furthermore, we showcase the use of BoPITO in a new tunable sampling protocol interpolating between ITOs trained on off-equilibrium simulations and an equilibrium model by incorporating unbiased correlation functions. Code is available at https://github.com/olsson-group/bopito . |
| title | Boltzmann priors for Implicit Transfer Operators |
| topic | Chemical Physics |
| url | https://arxiv.org/abs/2410.10605 |