DPLM-2: A Multimodal Diffusion Protein Language Model
Fuente:
arXiv
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| Main Authors: | Wang, Xinyou, Zheng, Zaixiang, Ye, Fei, Xue, Dongyu, Huang, Shujian, Gu, Quanquan |
|---|---|
| Format: | Preprint |
| Published: |
2024
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| Subjects: | |
| Online Access: | |
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