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Autores principales: Polson, Kio, Potapova, Marina, Meena, Uttam, Peiper, Chad, Brown, Joshua, Agar, Joshua, Greenberg, Jane
Formato: Preprint
Publicado: 2024
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Acceso en línea:https://arxiv.org/abs/2411.00677
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author Polson, Kio
Potapova, Marina
Meena, Uttam
Peiper, Chad
Brown, Joshua
Agar, Joshua
Greenberg, Jane
author_facet Polson, Kio
Potapova, Marina
Meena, Uttam
Peiper, Chad
Brown, Joshua
Agar, Joshua
Greenberg, Jane
contents Biologists study Diatoms, a fundamental algae, to assess the health of aquatic systems. Diatom specimens have traditionally been preserved on analog slides, where a single slide can contain thousands of these microscopic organisms. Digitization of these collections presents both metadata challenges and opportunities. This paper reports on metadata research aimed at providing access to a digital portion of the Academy of Natural Sciences' Diatom Herbarium, Drexel University. We report results of a 3-part study covering 1) a review of relevant metadata standards and a microscopy metadata framework shared by Hammer et al., 2) a baseline metadata alignment mapping current diatom metadata properties to standard metadata types, and 3) a metadata risk analysis associated with the course of standard data curation practices. This research is part of an effort involving the transfer of these digital slides to an new system, DataFed, to support global accessible. The final section of this paper includes a conclusion and discusses next steps.
format Preprint
id arxiv_https___arxiv_org_abs_2411_00677
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle Making Sense of Metadata Mess: Alignment & Risk Assessment for Diatom Data Use Case
Polson, Kio
Potapova, Marina
Meena, Uttam
Peiper, Chad
Brown, Joshua
Agar, Joshua
Greenberg, Jane
Information Retrieval
Biologists study Diatoms, a fundamental algae, to assess the health of aquatic systems. Diatom specimens have traditionally been preserved on analog slides, where a single slide can contain thousands of these microscopic organisms. Digitization of these collections presents both metadata challenges and opportunities. This paper reports on metadata research aimed at providing access to a digital portion of the Academy of Natural Sciences' Diatom Herbarium, Drexel University. We report results of a 3-part study covering 1) a review of relevant metadata standards and a microscopy metadata framework shared by Hammer et al., 2) a baseline metadata alignment mapping current diatom metadata properties to standard metadata types, and 3) a metadata risk analysis associated with the course of standard data curation practices. This research is part of an effort involving the transfer of these digital slides to an new system, DataFed, to support global accessible. The final section of this paper includes a conclusion and discusses next steps.
title Making Sense of Metadata Mess: Alignment & Risk Assessment for Diatom Data Use Case
topic Information Retrieval
url https://arxiv.org/abs/2411.00677