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Main Authors: Michel, Timm, Behr, Jürgen, Sabzalipoor, Hamed, Ibáñez-Redín, Gisela, Lietard, Jory, Schletterer, Thomas, Funck, Max, Somoza, Mark M.
Format: Preprint
Published: 2024
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Online Access:https://arxiv.org/abs/2411.06466
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author Michel, Timm
Behr, Jürgen
Sabzalipoor, Hamed
Ibáñez-Redín, Gisela
Lietard, Jory
Schletterer, Thomas
Funck, Max
Somoza, Mark M.
author_facet Michel, Timm
Behr, Jürgen
Sabzalipoor, Hamed
Ibáñez-Redín, Gisela
Lietard, Jory
Schletterer, Thomas
Funck, Max
Somoza, Mark M.
contents Large-scale synthesis of DNA and RNA is a crucial technology for modern biological research ranging from genomics to nucleic acid therapeutics and for technological research ranging from nanofabrication of materials to molecular-level writing of digital data. Maskless Array Synthesis (MAS) is a versatile and efficient approach for creating the required complex microarrays and libraries of DNA and other nucleic acids for these applications and, more generally, for the synthesis of sequence-defined engineered and biological oligomers. MAS uses digital photomasks displayed by a digital micromirror device (DMD) illuminated by an appropriate light source and imaged into a photochemical reaction chamber with an optical relay system. Previously, Offner relay systems were used for imaging, but modern DMD formats with more and smaller micromirrors favor a different solution. We present a desktop MAS optical system with the larger numerical aperture and larger field of view required by 1080p and other large-format DMDs. The resulting catadioptric relay is well suited to modern DMDs in this application, and is corrected for first order axial and lateral color, enabling the use of high-power LEDs as inexpensive and long-lasting light sources spanning the ultraviolet-to-violet to perform the required photochemistry. Additional characteristics of the system, including high contrast and low scatter, make it ideal for reducing the error rates in photochemical synthesis of biomolecules.
format Preprint
id arxiv_https___arxiv_org_abs_2411_06466
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle A color-corrected, high-contrast catadioptric relay for high-resolution biological photolithography
Michel, Timm
Behr, Jürgen
Sabzalipoor, Hamed
Ibáñez-Redín, Gisela
Lietard, Jory
Schletterer, Thomas
Funck, Max
Somoza, Mark M.
Optics
Large-scale synthesis of DNA and RNA is a crucial technology for modern biological research ranging from genomics to nucleic acid therapeutics and for technological research ranging from nanofabrication of materials to molecular-level writing of digital data. Maskless Array Synthesis (MAS) is a versatile and efficient approach for creating the required complex microarrays and libraries of DNA and other nucleic acids for these applications and, more generally, for the synthesis of sequence-defined engineered and biological oligomers. MAS uses digital photomasks displayed by a digital micromirror device (DMD) illuminated by an appropriate light source and imaged into a photochemical reaction chamber with an optical relay system. Previously, Offner relay systems were used for imaging, but modern DMD formats with more and smaller micromirrors favor a different solution. We present a desktop MAS optical system with the larger numerical aperture and larger field of view required by 1080p and other large-format DMDs. The resulting catadioptric relay is well suited to modern DMDs in this application, and is corrected for first order axial and lateral color, enabling the use of high-power LEDs as inexpensive and long-lasting light sources spanning the ultraviolet-to-violet to perform the required photochemistry. Additional characteristics of the system, including high contrast and low scatter, make it ideal for reducing the error rates in photochemical synthesis of biomolecules.
title A color-corrected, high-contrast catadioptric relay for high-resolution biological photolithography
topic Optics
url https://arxiv.org/abs/2411.06466