:: Library Catalog

Cover Image

Saved in:

Bibliographic Details
Main Authors:	Krueger, Ryan K., Engel, Megan C., Hausen, Ryan, Brenner, Michael P.
Format:	Preprint
Published:	2024
Subjects:	Biological Physics
Online Access:	https://arxiv.org/abs/2411.09216
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Tuning Colloidal Reactions
by: Krueger, Ryan, et al.
Published: (2023)

Iterative improvement of free energy landscape reconstructions with optimal protocols derived from differentiable simulations
by: Cheng, Oliver, et al.
Published: (2025)

Coarse-Graining via Lumping: Exact Calculations and Fundamental Limitations
by: Teza, Gianluca, et al.
Published: (2025)

On Macroscopic Intricate States
by: Dubois, François
Published: (2024)

Emergent Detailed Balance in Human Mobility under Temporal Coarse-Graining
by: Dong, Lei
Published: (2026)

Ionic transport through a protein nanopore: a Coarse-Grained Molecular Dynamics Study
by: Nathalie, Basdevant, et al.
Published: (2018)

Current rectification and ionic selectivity of alpha-hemolysin: Coarse-Grained Molecular Dynamics simulations
by: Dessaux, Delphine, et al.
Published: (2022)

Coarse-grained modelling of DNA-RNA hybrids
by: Ratajczyk, Eryk J., et al.
Published: (2023)

Macroscopic fluctuation-response theory and its use for gene regulatory networks
by: Aslyamov, Timur, et al.
Published: (2025)

Macroscopic bioinspired magnetic active matter and the physical limits of magnetotaxis
by: Sepúlveda, Néstor, et al.
Published: (2021)

Information processing driven by multicomponent surface condensates
by: Zentner, Aidan, et al.
Published: (2025)

Coarse-graining effect in axonal wiring databases confirms the exponential distance rule
by: Józsa, Máté, et al.
Published: (2023)

Microscopic Variability Alters Macroscopic Rotation Speed in Stochastic Spiral Waves
by: Kamphuis, Jolien, et al.
Published: (2025)

Neon tetra fish (Paracheirodon innesi) as farm-to-optical-table Bragg reflectors
by: Sheffield, D. Ryan, et al.
Published: (2024)

Restoring information in aged gene regulatory networks by single knock-ins
by: LeFebre, Ryan, et al.
Published: (2026)

Coarse-graining dense, deformable active particles
by: Nejad, Mehrana R., et al.
Published: (2025)

Modelling floral and arthropod electrostatics using a two-domain AAA-least squares algorithm
by: Harris, Samuel J., et al.
Published: (2024)

Fitness inference tested by in silico population genetics
by: Zeng, Hong-Li, et al.
Published: (2025)

Minority-Triggered Reorientations Yield Macroscopic Cascades and Enhanced Responsiveness in Swarms
by: Syga, Simon, et al.
Published: (2026)

ToSkA: Topological Skeleton Analysis for Network-Based Shape Representation and Evaluation of Objects from Cells to Death Stars
by: Ryan, Allyson Quinn, et al.
Published: (2023)

Structure-Based Experimental Datasets for Benchmarking Protein Simulation Force Fields
by: Cavender, Chapin E., et al.
Published: (2023)

General Purpose Inverse Design of Heterogeneous Finite-Sized Assemblies
by: Guttieres, Livia A. J., et al.
Published: (2025)

Coarse-graining nonequilibrium diffusions with Markov chains
by: Nartallo-Kaluarachchi, Ramón, et al.
Published: (2025)

Coarse-graining dynamics to maximize irreversibility
by: Yu, Qiwei, et al.
Published: (2025)

Physics-Informed Machine Learning for Microscale Drying of Plant-Based Foods: A Systematic Review of Computational Models and Experimental Insights
by: Batuwatta-Gamage, C. P., et al.
Published: (2025)

BoltzNCE: Learning Likelihoods for Boltzmann Generation with Stochastic Interpolants and Noise Contrastive Estimation
by: Aggarwal, Rishal, et al.
Published: (2025)

Protein overabundance is driven by growth robustness
by: Choi, H. James, et al.
Published: (2024)

Peptide Classification from Statistical Analysis of Nanopore Translocation Experiments
by: Hoßbach, Julian, et al.
Published: (2024)

A Macroscopically Consistent Reactive Langevin Dynamics Model
by: Isaacson, Samuel A., et al.
Published: (2025)

Chesapeake Bay Food Web: Robustness Analysis via Energy Cutoff in Complex Networks
by: Souza, Eduardo M. K., et al.
Published: (2026)

Noise-Driven Differentiation via Gene Frustration and Epigenetic Fixation
by: Plugers, Davey, et al.
Published: (2026)

Haematocrit and Shear Rate Modulate Local Cell-free Layer Thickness and Platelet Margination in Blood Flow Along a Sinusoidal Wall
by: Pero, Eleonora, et al.
Published: (2026)

Optimizing information transmission in optogenetic Wnt signaling
by: Witteveen, Olivier, et al.
Published: (2025)

Active Darcy's Law
by: Keogh, Ryan R., et al.
Published: (2023)

Applying an electrostatic cross-correlation to the CFTR-ATP interaction
by: Saad-Falcon, Alex, et al.
Published: (2024)

Automatic Forward Model Parameterization with Bayesian Inference of Conformational Populations
by: Raddi, Robert M., et al.
Published: (2024)

BARCODE: Biomaterial Activity Readouts to Categorize, Optimize, Design and Engineer for high throughput screening and characterization of dynamically restructuring soft materials
by: Chen, Qiaopeng, et al.
Published: (2025)

RNA Dynamics from Experimental and Computational Approaches
by: Bussi, Giovanni, et al.
Published: (2024)

Adolescent Binge Ethanol Exposure Confers Lasting Adult Alcohol Tolerance due to Neuroimmune Activation: Reversal by Inhibition of HMGB1
by: Fulton T. Crews, et al.
Published: (2026)

Social Physics of Bacteria: Avoidance of an Information Black Hole
by: Phan, Trung V., et al.
Published: (2024)