Conformation Generation using Transformer Flows
Fuente:
arXiv
Saved in:
| Main Authors: | Shah, Sohil Atul, Koltun, Vladlen |
|---|---|
| Format: | Preprint |
| Published: |
2024
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
ET-Flow: Equivariant Flow-Matching for Molecular Conformer Generation
by: Hassan, Majdi, et al.
Published: (2024)
by: Hassan, Majdi, et al.
Published: (2024)
Flow-Matching Based Refiner for Molecular Conformer Generation
by: Xu, Xiangyang, et al.
Published: (2025)
by: Xu, Xiangyang, et al.
Published: (2025)
Peptide-GPT: Generative Design of Peptides using Generative Pre-trained Transformers and Bio-informatic Supervision
by: Shah, Aayush, et al.
Published: (2024)
by: Shah, Aayush, et al.
Published: (2024)
Accelerating the Generation of Molecular Conformations with Progressive Distillation of Equivariant Latent Diffusion Models
by: Lacombe, Romain, et al.
Published: (2024)
by: Lacombe, Romain, et al.
Published: (2024)
Conformal Prediction in Dynamic Biological Systems
by: Portela, Alberto, et al.
Published: (2024)
by: Portela, Alberto, et al.
Published: (2024)
Generative Flows on Discrete State-Spaces: Enabling Multimodal Flows with Applications to Protein Co-Design
by: Campbell, Andrew, et al.
Published: (2024)
by: Campbell, Andrew, et al.
Published: (2024)
MolGuidance: Advanced Guidance Strategies for Conditional Molecular Generation with Flow Matching
by: Jin, Jirui, et al.
Published: (2025)
by: Jin, Jirui, et al.
Published: (2025)
Personalised Drug Identifier for Cancer Treatment with Transformers using Auxiliary Information
by: Jayagopal, Aishwarya, et al.
Published: (2024)
by: Jayagopal, Aishwarya, et al.
Published: (2024)
Automated Immunophenotyping Assessment for Diagnosing Childhood Acute Leukemia using Set-Transformers
by: Lygizou, Elpiniki Maria, et al.
Published: (2024)
by: Lygizou, Elpiniki Maria, et al.
Published: (2024)
Towards DNA-Encoded Library Generation with GFlowNets
by: Koziarski, Michał, et al.
Published: (2024)
by: Koziarski, Michał, et al.
Published: (2024)
Flow Matching for Count Data
by: Wei, Ganchao, et al.
Published: (2026)
by: Wei, Ganchao, et al.
Published: (2026)
FlowCyt: A Comparative Study of Deep Learning Approaches for Multi-Class Classification in Flow Cytometry Benchmarking
by: Bini, Lorenzo, et al.
Published: (2024)
by: Bini, Lorenzo, et al.
Published: (2024)
Modeling Microenvironment Trajectories on Spatial Transcriptomics with NicheFlow
by: Sakalyan, Kristiyan, et al.
Published: (2025)
by: Sakalyan, Kristiyan, et al.
Published: (2025)
Conformal Prediction Under Feedback Covariate Shift for Biomolecular Design
by: Fannjiang, Clara, et al.
Published: (2022)
by: Fannjiang, Clara, et al.
Published: (2022)
Equivariant Asynchronous Diffusion: An Adaptive Denoising Schedule for Accelerated Molecular Conformation Generation
by: An, Junyi, et al.
Published: (2026)
by: An, Junyi, et al.
Published: (2026)
A Morse Transform for Drug Discovery
by: Tanaka, Alexander M., et al.
Published: (2025)
by: Tanaka, Alexander M., et al.
Published: (2025)
Fusing Neural and Physical: Augment Protein Conformation Sampling with Tractable Simulations
by: Lu, Jiarui, et al.
Published: (2024)
by: Lu, Jiarui, et al.
Published: (2024)
Repurposing Protein Language Models for Latent Flow-Based Fitness Optimization
by: Arroyo, Amaru Caceres, et al.
Published: (2026)
by: Arroyo, Amaru Caceres, et al.
Published: (2026)
A Complete Guide to Spherical Equivariant Graph Transformers
by: Tang, Sophia
Published: (2025)
by: Tang, Sophia
Published: (2025)
A Fusion-Driven Approach of Attention-Based CNN-BiLSTM for Protein Family Classification -- ProFamNet
by: Ali, Bahar, et al.
Published: (2024)
by: Ali, Bahar, et al.
Published: (2024)
Transforming Multi-Omics Integration with GANs: Applications in Alzheimer's and Cancer
by: Reza, Md Selim, et al.
Published: (2025)
by: Reza, Md Selim, et al.
Published: (2025)
$\textit{BlockFormer}$ : Transformer-based inference from interaction maps
by: Touron, Eloïse, et al.
Published: (2026)
by: Touron, Eloïse, et al.
Published: (2026)
Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling
by: Lu, Jiarui, et al.
Published: (2023)
by: Lu, Jiarui, et al.
Published: (2023)
Central Dogma Transformer II: An AI Microscope for Understanding Cellular Regulatory Mechanisms
by: Ota, Nobuyuki
Published: (2026)
by: Ota, Nobuyuki
Published: (2026)
Chem-GMNet: A Sphere-Native Geometric Transformer for Molecular Property Prediction
by: Warrier, Deepak, et al.
Published: (2026)
by: Warrier, Deepak, et al.
Published: (2026)
Causality-Induced Positional Encoding for Transformer-Based Representation Learning of Non-Sequential Features
by: Xu, Kaichen, et al.
Published: (2025)
by: Xu, Kaichen, et al.
Published: (2025)
Graph-Based Bidirectional Transformer Decision Threshold Adjustment Algorithm for Class-Imbalanced Molecular Data
by: Hayes, Nicole, et al.
Published: (2024)
by: Hayes, Nicole, et al.
Published: (2024)
Transformer-Based Multi-Modal Temporal Embeddings for Explainable Metabolic Phenotyping in Type 1 Diabetes
by: Khokhar, Pir Bakhsh, et al.
Published: (2026)
by: Khokhar, Pir Bakhsh, et al.
Published: (2026)
Improving AlphaFlow for Efficient Protein Ensembles Generation
by: Li, Shaoning, et al.
Published: (2024)
by: Li, Shaoning, et al.
Published: (2024)
Target Specific De Novo Design of Drug Candidate Molecules with Graph Transformer-based Generative Adversarial Networks
by: Ünlü, Atabey, et al.
Published: (2023)
by: Ünlü, Atabey, et al.
Published: (2023)
Improving Molecule Generation and Drug Discovery with a Knowledge-enhanced Generative Model
by: Malusare, Aditya, et al.
Published: (2024)
by: Malusare, Aditya, et al.
Published: (2024)
Sleep Apnea Detection on a Wireless Multimodal Wearable Device Without Oxygen Flow Using a Mamba-based Deep Learning Approach
by: Luszczynski, Dominik, et al.
Published: (2025)
by: Luszczynski, Dominik, et al.
Published: (2025)
Generative Humanization for Therapeutic Antibodies
by: Gordon, Cade, et al.
Published: (2024)
by: Gordon, Cade, et al.
Published: (2024)
CaLMFlow: Volterra Flow Matching using Causal Language Models
by: He, Sizhuang, et al.
Published: (2024)
by: He, Sizhuang, et al.
Published: (2024)
Leveraging Phytolith Research using Artificial Intelligence
by: Ramón, Andrés G. Mejía, et al.
Published: (2026)
by: Ramón, Andrés G. Mejía, et al.
Published: (2026)
Enhancing selectivity using Wasserstein distance based reweighing
by: Worah, Pratik
Published: (2024)
by: Worah, Pratik
Published: (2024)
Improving Antibody Humanness Prediction using Patent Data
by: Ucar, Talip, et al.
Published: (2024)
by: Ucar, Talip, et al.
Published: (2024)
BAPULM: Binding Affinity Prediction using Language Models
by: Meda, Radheesh Sharma, et al.
Published: (2024)
by: Meda, Radheesh Sharma, et al.
Published: (2024)
AIRI: Predicting Retention Indices and their Uncertainties using Artificial Intelligence
by: Geer, Lewis Y., et al.
Published: (2024)
by: Geer, Lewis Y., et al.
Published: (2024)
Protein sequence classification using natural language processing techniques
by: Perveen, Huma, et al.
Published: (2024)
by: Perveen, Huma, et al.
Published: (2024)
Similar Items
-
ET-Flow: Equivariant Flow-Matching for Molecular Conformer Generation
by: Hassan, Majdi, et al.
Published: (2024) -
Flow-Matching Based Refiner for Molecular Conformer Generation
by: Xu, Xiangyang, et al.
Published: (2025) -
Peptide-GPT: Generative Design of Peptides using Generative Pre-trained Transformers and Bio-informatic Supervision
by: Shah, Aayush, et al.
Published: (2024) -
Accelerating the Generation of Molecular Conformations with Progressive Distillation of Equivariant Latent Diffusion Models
by: Lacombe, Romain, et al.
Published: (2024) -
Conformal Prediction in Dynamic Biological Systems
by: Portela, Alberto, et al.
Published: (2024)