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Main Authors: Yang, Eric, Hu, Pengfei, Han, Xiaoxue, Ning, Yue
Format: Preprint
Published: 2024
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Online Access:https://arxiv.org/abs/2411.11161
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author Yang, Eric
Hu, Pengfei
Han, Xiaoxue
Ning, Yue
author_facet Yang, Eric
Hu, Pengfei
Han, Xiaoxue
Ning, Yue
contents The adoption of digital systems in healthcare has resulted in the accumulation of vast electronic health records (EHRs), offering valuable data for machine learning methods to predict patient health outcomes. However, single-visit records of patients are often neglected in the training process due to the lack of annotations of next-visit information, thereby limiting the predictive and expressive power of machine learning models. In this paper, we present a novel framework MPLite that utilizes Multi-aspect Pretraining with Lab results through a light-weight neural network to enhance medical concept representation and predict future health outcomes of individuals. By incorporating both structured medical data and additional information from lab results, our approach fully leverages patient admission records. We design a pretraining module that predicts medical codes based on lab results, ensuring robust prediction by fusing multiple aspects of features. Our experimental evaluation using both MIMIC-III and MIMIC-IV datasets demonstrates improvements over existing models in diagnosis prediction and heart failure prediction tasks, achieving a higher weighted-F1 and recall with MPLite. This work reveals the potential of integrating diverse aspects of data to advance predictive modeling in healthcare.
format Preprint
id arxiv_https___arxiv_org_abs_2411_11161
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle MPLite: Multi-Aspect Pretraining for Mining Clinical Health Records
Yang, Eric
Hu, Pengfei
Han, Xiaoxue
Ning, Yue
Machine Learning
Artificial Intelligence
The adoption of digital systems in healthcare has resulted in the accumulation of vast electronic health records (EHRs), offering valuable data for machine learning methods to predict patient health outcomes. However, single-visit records of patients are often neglected in the training process due to the lack of annotations of next-visit information, thereby limiting the predictive and expressive power of machine learning models. In this paper, we present a novel framework MPLite that utilizes Multi-aspect Pretraining with Lab results through a light-weight neural network to enhance medical concept representation and predict future health outcomes of individuals. By incorporating both structured medical data and additional information from lab results, our approach fully leverages patient admission records. We design a pretraining module that predicts medical codes based on lab results, ensuring robust prediction by fusing multiple aspects of features. Our experimental evaluation using both MIMIC-III and MIMIC-IV datasets demonstrates improvements over existing models in diagnosis prediction and heart failure prediction tasks, achieving a higher weighted-F1 and recall with MPLite. This work reveals the potential of integrating diverse aspects of data to advance predictive modeling in healthcare.
title MPLite: Multi-Aspect Pretraining for Mining Clinical Health Records
topic Machine Learning
Artificial Intelligence
url https://arxiv.org/abs/2411.11161