Cover Image

Computational and Experimental Exploration of Protein Fitness Landscapes: Navigating Smooth and Rugged Terrains

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Sandhu, Mahakaran, Chen, John, Matthews, Dana, Spence, Matthew A, Pulsford, Sacha B, Gall, Barnabas, Nichols, James, Tokuriki, Nobuhiko, Jackson, Colin J
Format:	Preprint
Published:	2024
Subjects:	Populations and Evolution
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Evolutionary Hysteresis: Cycling about in a Rugged Landscape
by: Piszkin, Luke, et al.
Published: (2025)

Protein Evolution as a Complex System
by: Gall, Barnabas, et al.
Published: (2024)

Can genomic analysis actually estimate past population size?
by: Bansal, Janeesh K., et al.
Published: (2025)

The Human Genomic Landscape of Oceania
by: Quinto-Cortés, Consuelo D., et al.
Published: (2024)

Fitness Inference in Presence of Migrations between Coupled Evolving Populations
by: Huang, Yu-Han, et al.
Published: (2026)

grenedalf: population genetic statistics for the next generation of pool sequencing
by: Czech, Lucas, et al.
Published: (2023)

Describing the Persistence Landscape for Introducing Microbes into Complex Communities
by: McDermott, Jason E., et al.
Published: (2025)

Evaluation of the transmission dynamics of Lawsonia intracellularis in swine
by: Leite, Fernando L., et al.
Published: (2025)

PhyloProfile v2: Scalable Exploration of Multilayered Phylogenetic Profiles via Dimensionality Reduction
by: Tran, Vinh, et al.
Published: (2025)

Modeling and Inferring Metacommunity Dynamics with Maximum Caliber
by: Jackson, Zachary, et al.
Published: (2025)

Fitness inference tested by in silico population genetics
by: Zeng, Hong-Li, et al.
Published: (2025)

A Combined Experimental and Mathematical Study of The Evolution of Microbial Community Composed of Interacting Staphylococcus Strains
by: Alghamdi, Nouf, et al.
Published: (2024)

Mechanisms of nearshore retention and offshore export of mussel larvae over the Agulhas Bank
by: Weidberg, Nicolas, et al.
Published: (2024)

An Exploration of Modeling Approaches for Capturing Seasonal Transmission in Stochastic Epidemic Models
by: Hridoy, Mahmudul Bari
Published: (2024)

$K$-Branching Random Walk with Noisy Selection: Large Population Limits and Phase Transitions
by: Desmarais, Colin, et al.
Published: (2025)

The Case for Controls: Identifying outbreak risk factors through case-control comparisons
by: Fefferman, Nina H., et al.
Published: (2023)

Connecting the Dots: Range Expansions across Landscapes with Quenched Noise
by: Nuñez, Jimmy Gonzalez, et al.
Published: (2023)

Fitness and Overfitness: Implicit Regularization in Evolutionary Dynamics
by: Rappeport, Hagai, et al.
Published: (2025)

Evolution of Plastic Dispersal in Stable Environment: Local Information of Fitness Consequence
by: Liang, Wayne, et al.
Published: (2026)

Navigating Uncertainty: Risk-Averse vs. Risk-Prone Strategies in Populations Facing Demographic and Environmental Stochasticity
by: Ibáñez, Rubén Calvo, et al.
Published: (2024)

Phylogenetic Corrections and Higher-Order Sequence Statistics in Protein Families: The Potts Model vs MSA Transformer
by: Khatri, Kisan, et al.
Published: (2025)

Evaluating the effectiveness of Stochastic CTMC and deterministic models in correlating rabies persistence in human and dog populations
by: Charles, Mfano, et al.
Published: (2025)

Mutation Rate Variation Across Genomic Regions in \textit{Arabidopsis thaliana}
by: Heinrich-Mora, Elisa, et al.
Published: (2026)

A metapopulation model for the spread of cholera
by: Saad, Abdramane Annour, et al.
Published: (2025)

Duration of Transients in Outbreaks: When can Infectiousness be Estimated?
by: Mielke, Adam, et al.
Published: (2023)

Negligible effects of environmental fluctuations on the maintenance of coral biodiversity: A test of five storage effects
by: Johnson, Evan C., et al.
Published: (2025)

A note on metapopulation models
by: Ayabina, Diepreye, et al.
Published: (2025)

Contribution to the study of the flora in the central-west of Tunisia landscape dynamics and evaluation of plant biodiversity of mountain Bouchebka
by: Islem, Saadaoui, et al.
Published: (2025)

Dynamics and control of maize infection by Busseola fusca: multi-seasonal modeling and biocontrol strategies
by: Djuikem, Clotilde, et al.
Published: (2025)

The importance of exploration: Modelling site-constant foraging
by: MacQueen, Sarah A., et al.
Published: (2025)

Applied Antifragility in Natural Systems: Evolutionary Antifragility
by: Axenie, Cristian, et al.
Published: (2025)

Warming demands extensive tropical but minimal temperate management in plant-pollinator networks
by: Datta, Adrija, et al.
Published: (2025)

Sunlight-heated refugia protect frogs from chytridiomycosis: a mathematical modelling study
by: Miller, Claire M., et al.
Published: (2025)

Quantifying scale-free behaviors in Rock-Paper-Scissors Models as a function of Mobility
by: Bazeia, D., et al.
Published: (2025)

Cooperation guides evolution in a minimal model of biological evolution
by: Houghton, Conor
Published: (2025)

Household scale Wolbachia release strategies for effective dengue control
by: Barlow, Abby, et al.
Published: (2025)

Stochastic dynamics of two-compartment cell proliferation models with regulatory mechanisms for hematopoiesis
by: Wang, Ren-Yi, et al.
Published: (2024)

Partitioning of Eddy Covariance Footprint Evapotranspiration Using Field Data, UAS Observations and GeoAI in the U.S. Chihuahuan Desert
by: Howlider, Habibur R., et al.
Published: (2025)

Interplay between intraspecific suppression and environment in shaping biodiversity
by: Yang, Seong-Gyu, et al.
Published: (2023)

Stability of difference equations with interspecific density dependence, competition, and maturation delays
by: Hosack, Geoffrey R., et al.
Published: (2025)