Metrics for classes of semi-binary phylogenetic networks using $μ$-representations
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arXiv
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| Autori principali: | , , |
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| Natura: | Preprint |
| Pubblicazione: |
2024
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| _version_ | 1866908469773205504 |
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| author | Reichling, Christopher van Iersel, Leo Murakami, Yukihiro |
| author_facet | Reichling, Christopher van Iersel, Leo Murakami, Yukihiro |
| contents | Phylogenetic networks are useful in representing the evolutionary history of taxa. In certain scenarios, one requires a way to compare different networks. In practice, this can be rather difficult, except within specific classes of networks. In this paper, we derive metrics for the class of \emph{orchard networks} and the class of \emph{strongly reticulation-visible} networks, from variants of so-called \emph{$μ$-representations}, which are vector representations of networks. For both network classes, we impose degree constraints on the vertices, by considering \emph{semi-binary} networks. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2412_05107 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Metrics for classes of semi-binary phylogenetic networks using $μ$-representations Reichling, Christopher van Iersel, Leo Murakami, Yukihiro Populations and Evolution Combinatorics Phylogenetic networks are useful in representing the evolutionary history of taxa. In certain scenarios, one requires a way to compare different networks. In practice, this can be rather difficult, except within specific classes of networks. In this paper, we derive metrics for the class of \emph{orchard networks} and the class of \emph{strongly reticulation-visible} networks, from variants of so-called \emph{$μ$-representations}, which are vector representations of networks. For both network classes, we impose degree constraints on the vertices, by considering \emph{semi-binary} networks. |
| title | Metrics for classes of semi-binary phylogenetic networks using $μ$-representations |
| topic | Populations and Evolution Combinatorics |
| url | https://arxiv.org/abs/2412.05107 |