PyPulse: A Python Library for Biosignal Imputation

Fuente: arXiv
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Main Authors: Gao, Kevin, Xu, Maxwell A., Rehg, James M., Moreno, Alexander
Format: Preprint
Published: 2024
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author Gao, Kevin
Xu, Maxwell A.
Rehg, James M.
Moreno, Alexander
author_facet Gao, Kevin
Xu, Maxwell A.
Rehg, James M.
Moreno, Alexander
contents We introduce PyPulse, a Python package for imputation of biosignals in both clinical and wearable sensor settings. Missingness is commonplace in these settings and can arise from multiple causes, such as insecure sensor attachment or data transmission loss. PyPulse's framework provides a modular and extendable framework with high ease-of-use for a broad userbase, including non-machine-learning bioresearchers. Specifically, its new capabilities include using pre-trained imputation methods out-of-the-box on custom datasets, running the full workflow of training or testing a baseline method with a single line of code, and comparing baseline methods in an interactive visualization tool. We released PyPulse under the MIT License on Github and PyPI. The source code can be found at: https://github.com/rehg-lab/pulseimpute.
format Preprint
id arxiv_https___arxiv_org_abs_2412_06382
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle PyPulse: A Python Library for Biosignal Imputation
Gao, Kevin
Xu, Maxwell A.
Rehg, James M.
Moreno, Alexander
Machine Learning
Software Engineering
We introduce PyPulse, a Python package for imputation of biosignals in both clinical and wearable sensor settings. Missingness is commonplace in these settings and can arise from multiple causes, such as insecure sensor attachment or data transmission loss. PyPulse's framework provides a modular and extendable framework with high ease-of-use for a broad userbase, including non-machine-learning bioresearchers. Specifically, its new capabilities include using pre-trained imputation methods out-of-the-box on custom datasets, running the full workflow of training or testing a baseline method with a single line of code, and comparing baseline methods in an interactive visualization tool. We released PyPulse under the MIT License on Github and PyPI. The source code can be found at: https://github.com/rehg-lab/pulseimpute.
title PyPulse: A Python Library for Biosignal Imputation
topic Machine Learning
Software Engineering
url https://arxiv.org/abs/2412.06382