Ensemble Learning and 3D Pix2Pix for Comprehensive Brain Tumor Analysis in Multimodal MRI
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| Format: | Preprint |
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2024
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| author | Zeineldin, Ramy A. Mathis-Ullrich, Franziska |
| author_facet | Zeineldin, Ramy A. Mathis-Ullrich, Franziska |
| contents | Motivated by the need for advanced solutions in the segmentation and inpainting of glioma-affected brain regions in multi-modal magnetic resonance imaging (MRI), this study presents an integrated approach leveraging the strengths of ensemble learning with hybrid transformer models and convolutional neural networks (CNNs), alongside the innovative application of 3D Pix2Pix Generative Adversarial Network (GAN). Our methodology combines robust tumor segmentation capabilities, utilizing axial attention and transformer encoders for enhanced spatial relationship modeling, with the ability to synthesize biologically plausible brain tissue through 3D Pix2Pix GAN. This integrated approach addresses the BraTS 2023 cluster challenges by offering precise segmentation and realistic inpainting, tailored for diverse tumor types and sub-regions. The results demonstrate outstanding performance, evidenced by quantitative evaluations such as the Dice Similarity Coefficient (DSC), Hausdorff Distance (HD95) for segmentation, and Structural Similarity Index Measure (SSIM), Peak Signal-to-Noise Ratio (PSNR), and Mean-Square Error (MSE) for inpainting. Qualitative assessments further validate the high-quality, clinically relevant outputs. In conclusion, this study underscores the potential of combining advanced machine learning techniques for comprehensive brain tumor analysis, promising significant advancements in clinical decision-making and patient care within the realm of medical imaging. |
| format | Preprint |
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arxiv_https___arxiv_org_abs_2412_11849 |
| institution | arXiv |
| publishDate | 2024 |
| record_format | arxiv |
| spellingShingle | Ensemble Learning and 3D Pix2Pix for Comprehensive Brain Tumor Analysis in Multimodal MRI Zeineldin, Ramy A. Mathis-Ullrich, Franziska Image and Video Processing Computer Vision and Pattern Recognition Machine Learning Motivated by the need for advanced solutions in the segmentation and inpainting of glioma-affected brain regions in multi-modal magnetic resonance imaging (MRI), this study presents an integrated approach leveraging the strengths of ensemble learning with hybrid transformer models and convolutional neural networks (CNNs), alongside the innovative application of 3D Pix2Pix Generative Adversarial Network (GAN). Our methodology combines robust tumor segmentation capabilities, utilizing axial attention and transformer encoders for enhanced spatial relationship modeling, with the ability to synthesize biologically plausible brain tissue through 3D Pix2Pix GAN. This integrated approach addresses the BraTS 2023 cluster challenges by offering precise segmentation and realistic inpainting, tailored for diverse tumor types and sub-regions. The results demonstrate outstanding performance, evidenced by quantitative evaluations such as the Dice Similarity Coefficient (DSC), Hausdorff Distance (HD95) for segmentation, and Structural Similarity Index Measure (SSIM), Peak Signal-to-Noise Ratio (PSNR), and Mean-Square Error (MSE) for inpainting. Qualitative assessments further validate the high-quality, clinically relevant outputs. In conclusion, this study underscores the potential of combining advanced machine learning techniques for comprehensive brain tumor analysis, promising significant advancements in clinical decision-making and patient care within the realm of medical imaging. |
| title | Ensemble Learning and 3D Pix2Pix for Comprehensive Brain Tumor Analysis in Multimodal MRI |
| topic | Image and Video Processing Computer Vision and Pattern Recognition Machine Learning |
| url | https://arxiv.org/abs/2412.11849 |