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Main Authors: Sartipi, Shadi, Andersen, Mie, Hauglund, Natalie, Kjaerby, Celia, Untiet, Verena, Nedergaard, Maiken, Cetin, Mujdat
Format: Preprint
Published: 2024
Subjects:
Online Access:https://arxiv.org/abs/2412.15412
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author Sartipi, Shadi
Andersen, Mie
Hauglund, Natalie
Kjaerby, Celia
Untiet, Verena
Nedergaard, Maiken
Cetin, Mujdat
author_facet Sartipi, Shadi
Andersen, Mie
Hauglund, Natalie
Kjaerby, Celia
Untiet, Verena
Nedergaard, Maiken
Cetin, Mujdat
contents Efficiently identifying sleep stages is crucial for unraveling the intricacies of sleep in both preclinical and clinical research. The labor-intensive nature of manual sleep scoring, demanding substantial expertise, has prompted a surge of interest in automated alternatives. Sleep studies in mice play a significant role in understanding sleep patterns and disorders and underscore the need for robust scoring methodologies. In response, this study introduces LG-Sleep, a novel subject-independent deep neural network architecture designed for mice sleep scoring through electroencephalogram (EEG) signals. LG-Sleep extracts local and global temporal transitions within EEG signals to categorize sleep data into three stages: wake, rapid eye movement (REM) sleep, and non-rapid eye movement (NREM) sleep. The model leverages local and global temporal information by employing time-distributed convolutional neural networks to discern local temporal transitions in EEG data. Subsequently, features derived from the convolutional filters traverse long short-term memory blocks, capturing global transitions over extended periods. Crucially, the model is optimized in an autoencoder-decoder fashion, facilitating generalization across distinct subjects and adapting to limited training samples. Experimental findings demonstrate superior performance of LG-Sleep compared to conventional deep neural networks. Moreover, the model exhibits good performance across different sleep stages even when tasked with scoring based on limited training samples.
format Preprint
id arxiv_https___arxiv_org_abs_2412_15412
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle LG-Sleep: Local and Global Temporal Dependencies for Mice Sleep Scoring
Sartipi, Shadi
Andersen, Mie
Hauglund, Natalie
Kjaerby, Celia
Untiet, Verena
Nedergaard, Maiken
Cetin, Mujdat
Machine Learning
Efficiently identifying sleep stages is crucial for unraveling the intricacies of sleep in both preclinical and clinical research. The labor-intensive nature of manual sleep scoring, demanding substantial expertise, has prompted a surge of interest in automated alternatives. Sleep studies in mice play a significant role in understanding sleep patterns and disorders and underscore the need for robust scoring methodologies. In response, this study introduces LG-Sleep, a novel subject-independent deep neural network architecture designed for mice sleep scoring through electroencephalogram (EEG) signals. LG-Sleep extracts local and global temporal transitions within EEG signals to categorize sleep data into three stages: wake, rapid eye movement (REM) sleep, and non-rapid eye movement (NREM) sleep. The model leverages local and global temporal information by employing time-distributed convolutional neural networks to discern local temporal transitions in EEG data. Subsequently, features derived from the convolutional filters traverse long short-term memory blocks, capturing global transitions over extended periods. Crucially, the model is optimized in an autoencoder-decoder fashion, facilitating generalization across distinct subjects and adapting to limited training samples. Experimental findings demonstrate superior performance of LG-Sleep compared to conventional deep neural networks. Moreover, the model exhibits good performance across different sleep stages even when tasked with scoring based on limited training samples.
title LG-Sleep: Local and Global Temporal Dependencies for Mice Sleep Scoring
topic Machine Learning
url https://arxiv.org/abs/2412.15412