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Main Authors: Hall, J. M., Guenza, M. G.
Format: Preprint
Published: 2024
Subjects:
Online Access:https://arxiv.org/abs/2412.19398
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author Hall, J. M.
Guenza, M. G.
author_facet Hall, J. M.
Guenza, M. G.
contents We present a generalized Einstein relation for the friction coefficients associated with an underlying memory kernel in terms of observable time correlation functions. There is considerable freedom in the correlations involved, and this allows the expression to be tailored to the particular system to achieve numerical stability. We demonstrate this by recovering the site-specific friction coefficients from trajectories of a freely diffusing model trimer, and we show that the accuracy is greatly improved over established Volterra inversion methods for kernel extraction.
format Preprint
id arxiv_https___arxiv_org_abs_2412_19398
institution arXiv
publishDate 2024
record_format arxiv
spellingShingle A Generalized Einstein Relation for Markovian Friction Coefficients from Molecular Trajectories
Hall, J. M.
Guenza, M. G.
Soft Condensed Matter
Statistical Mechanics
We present a generalized Einstein relation for the friction coefficients associated with an underlying memory kernel in terms of observable time correlation functions. There is considerable freedom in the correlations involved, and this allows the expression to be tailored to the particular system to achieve numerical stability. We demonstrate this by recovering the site-specific friction coefficients from trajectories of a freely diffusing model trimer, and we show that the accuracy is greatly improved over established Volterra inversion methods for kernel extraction.
title A Generalized Einstein Relation for Markovian Friction Coefficients from Molecular Trajectories
topic Soft Condensed Matter
Statistical Mechanics
url https://arxiv.org/abs/2412.19398