ViDTA: Enhanced Drug-Target Affinity Prediction via Virtual Graph Nodes and Attention-based Feature Fusion
Fuente:
arXiv
Saved in:
| Main Authors: | Li, Minghui, Guo, Zikang, Wu, Yang, Guo, Peijin, Shi, Yao, Hu, Shengshan, Wan, Wei, Hu, Shengqing |
|---|---|
| Format: | Preprint |
| Published: |
2024
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
HiF-DTA: Hierarchical Feature Learning Network for Drug-Target Affinity Prediction
by: Li, Minghui, et al.
Published: (2025)
by: Li, Minghui, et al.
Published: (2025)
A Geometric Graph-Based Deep Learning Model for Drug-Target Affinity Prediction
by: Rana, Md Masud, et al.
Published: (2025)
by: Rana, Md Masud, et al.
Published: (2025)
A Cross-Field Fusion Strategy for Drug-Target Interaction Prediction
by: Zhang, Hongzhi, et al.
Published: (2024)
by: Zhang, Hongzhi, et al.
Published: (2024)
Exploiting Pre-trained Models for Drug Target Affinity Prediction with Nearest Neighbors
by: Pei, Qizhi, et al.
Published: (2024)
by: Pei, Qizhi, et al.
Published: (2024)
Persistent Directed Flag Laplacian (PDFL)-Based Machine Learning for Protein-Ligand Binding Affinity Prediction
by: Zia, Mushal, et al.
Published: (2024)
by: Zia, Mushal, et al.
Published: (2024)
A Heterogeneous Network-based Contrastive Learning Approach for Predicting Drug-Target Interaction
by: Hu, Junwei, et al.
Published: (2024)
by: Hu, Junwei, et al.
Published: (2024)
Enhancing Drug-Target Interaction Prediction through Transfer Learning from Activity Cliff Prediction Tasks
by: Ibragimova, Regina, et al.
Published: (2024)
by: Ibragimova, Regina, et al.
Published: (2024)
Remodeling Peptide-MHC-TCR Triad Binding as Sequence Fusion for Immunogenicity Prediction
by: Ma, Jiahao, et al.
Published: (2025)
by: Ma, Jiahao, et al.
Published: (2025)
HCAF-DTA: drug-target binding affinity prediction with cross-attention fused hypergraph neural networks
by: Li, Jiannuo, et al.
Published: (2025)
by: Li, Jiannuo, et al.
Published: (2025)
Site4Drug: Predicting Drug-Binding Target Sites with an AI Agent
by: Kim, Taehan, et al.
Published: (2026)
by: Kim, Taehan, et al.
Published: (2026)
DecoyDB: A Dataset for Graph Contrastive Learning in Protein-Ligand Binding Affinity Prediction
by: Zhang, Yupu, et al.
Published: (2025)
by: Zhang, Yupu, et al.
Published: (2025)
Targeting Melanoma-Specific Tyrosinase: Cyclic Peptide Disrupts Actin Dynamics for Precision Apoptosis Induction
by: Zhao, Ruoyang, et al.
Published: (2025)
by: Zhao, Ruoyang, et al.
Published: (2025)
DrugCLIP: Contrastive Drug-Disease Interaction For Drug Repurposing
by: Lu, Yingzhou, et al.
Published: (2024)
by: Lu, Yingzhou, et al.
Published: (2024)
Artificial Intelligence Approaches for Anti-Addiction Drug Discovery
by: Chen, Dong, et al.
Published: (2025)
by: Chen, Dong, et al.
Published: (2025)
Ligandformer: A Graph Neural Network for Predicting Compound Property with Robust Interpretation
by: Guo, Jinjiang, et al.
Published: (2022)
by: Guo, Jinjiang, et al.
Published: (2022)
Multi-Modality Representation Learning for Antibody-Antigen Interactions Prediction
by: Guo, Peijin, et al.
Published: (2025)
by: Guo, Peijin, et al.
Published: (2025)
VN-EGNN: E(3)-Equivariant Graph Neural Networks with Virtual Nodes Enhance Protein Binding Site Identification
by: Sestak, Florian, et al.
Published: (2024)
by: Sestak, Florian, et al.
Published: (2024)
Dimeric Drug Polymeric Micelles with Acid-Active Tumor Targeting and FRET-indicated Drug Release
by: Guo, Xing, et al.
Published: (2024)
by: Guo, Xing, et al.
Published: (2024)
Mesoporous Silica Nanoparticles-based Smart Nanocarriers for Targeted Drug Delivery in Colorectal Cancer Therapy
by: Mann, Rochelle A., et al.
Published: (2024)
by: Mann, Rochelle A., et al.
Published: (2024)
Graph-structured Small Molecule Drug Discovery Through Deep Learning: Progress, Challenges, and Opportunities
by: Li, Kun, et al.
Published: (2025)
by: Li, Kun, et al.
Published: (2025)
ABConformer: Physics-inspired Sliding Attention for Antibody-Antigen Interface Prediction
by: You, Zhang-Yu, et al.
Published: (2025)
by: You, Zhang-Yu, et al.
Published: (2025)
Topological Learning Prediction of Virus-like Particle Stoichiometry and Stability
by: Liu, Xiang, et al.
Published: (2025)
by: Liu, Xiang, et al.
Published: (2025)
TerraBind: Fast and Accurate Binding Affinity Prediction through Coarse Structural Representations
by: Rossi, Matteo, et al.
Published: (2026)
by: Rossi, Matteo, et al.
Published: (2026)
ZeroFold: Protein-RNA Binding Affinity Predictions from Pre-Structural Embeddings
by: Hanke, Josef, et al.
Published: (2026)
by: Hanke, Josef, et al.
Published: (2026)
DrugPilot: LLM-based Parameterized Reasoning Agent for Drug Discovery
by: Li, Kun, et al.
Published: (2025)
by: Li, Kun, et al.
Published: (2025)
Reprogramming Pretrained Target-Specific Diffusion Models for Dual-Target Drug Design
by: Zhou, Xiangxin, et al.
Published: (2024)
by: Zhou, Xiangxin, et al.
Published: (2024)
DDIPrompt: Drug-Drug Interaction Event Prediction based on Graph Prompt Learning
by: Wang, Yingying, et al.
Published: (2024)
by: Wang, Yingying, et al.
Published: (2024)
From Static to Dynamic Structures: Improving Binding Affinity Prediction with Graph-Based Deep Learning
by: Min, Yaosen, et al.
Published: (2022)
by: Min, Yaosen, et al.
Published: (2022)
Thin Bridges for Drug Text Alignment: Lightweight Contrastive Learning for Target Specific Drug Retrieval
by: Tupakula, Mallikarjuna
Published: (2025)
by: Tupakula, Mallikarjuna
Published: (2025)
Towards Precision Protein-Ligand Affinity Prediction Benchmark: A Complete and Modification-Aware DAVIS Dataset
by: Wu, Ming-Hsiu, et al.
Published: (2025)
by: Wu, Ming-Hsiu, et al.
Published: (2025)
Exploring AlphaFold 3 for CD47 Antibody-Antigen Binding Affinity: An Unexpected Discovery of Reverse docking
by: Xu, Yiyang, et al.
Published: (2025)
by: Xu, Yiyang, et al.
Published: (2025)
ProS2Vi: a Python Tool for Visualizing Proteins Secondary Structure
by: Qasim, Luckman, et al.
Published: (2024)
by: Qasim, Luckman, et al.
Published: (2024)
K-Paths: Reasoning over Graph Paths for Drug Repurposing and Drug Interaction Prediction
by: Abdullahi, Tassallah, et al.
Published: (2025)
by: Abdullahi, Tassallah, et al.
Published: (2025)
ZeroDDI: A Zero-Shot Drug-Drug Interaction Event Prediction Method with Semantic Enhanced Learning and Dual-Modal Uniform Alignment
by: Wang, Ziyan, et al.
Published: (2024)
by: Wang, Ziyan, et al.
Published: (2024)
Advanced Targeted Drug Delivery for Colon Cancer Using Pristine and Surface-modified Hydroxyapatite Nanoparticles: Synthesis, Characterization, and pH-Responsive Release
by: Withrow, Alexander David McGuire, et al.
Published: (2024)
by: Withrow, Alexander David McGuire, et al.
Published: (2024)
Immunogenicity Prediction with Dual Attention Enables Vaccine Target Selection
by: Li, Song, et al.
Published: (2024)
by: Li, Song, et al.
Published: (2024)
Preservation Constraints on aDNA Information Generation and the HSF Posterior Sourcing Framework: A First-Principles Critique of Conventional Methods
by: Zhao, Wan-Qian, et al.
Published: (2026)
by: Zhao, Wan-Qian, et al.
Published: (2026)
FusionDTI: Fine-grained Binding Discovery with Token-level Fusion for Drug-Target Interaction
by: Meng, Zhaohan, et al.
Published: (2024)
by: Meng, Zhaohan, et al.
Published: (2024)
CoPRA: Bridging Cross-domain Pretrained Sequence Models with Complex Structures for Protein-RNA Binding Affinity Prediction
by: Han, Rong, et al.
Published: (2024)
by: Han, Rong, et al.
Published: (2024)
Towards a Better Model with Dual Transformer for Drug Response Prediction
by: Li, Kun, et al.
Published: (2022)
by: Li, Kun, et al.
Published: (2022)
Similar Items
-
HiF-DTA: Hierarchical Feature Learning Network for Drug-Target Affinity Prediction
by: Li, Minghui, et al.
Published: (2025) -
A Geometric Graph-Based Deep Learning Model for Drug-Target Affinity Prediction
by: Rana, Md Masud, et al.
Published: (2025) -
A Cross-Field Fusion Strategy for Drug-Target Interaction Prediction
by: Zhang, Hongzhi, et al.
Published: (2024) -
Exploiting Pre-trained Models for Drug Target Affinity Prediction with Nearest Neighbors
by: Pei, Qizhi, et al.
Published: (2024) -
Persistent Directed Flag Laplacian (PDFL)-Based Machine Learning for Protein-Ligand Binding Affinity Prediction
by: Zia, Mushal, et al.
Published: (2024)