Comprehensive Pathological Image Segmentation via Teacher Aggregation for Tumor Microenvironment Analysis

Fuente: arXiv
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Autori principali: Komura, Daisuke, Takao, Maki, Ochi, Mieko, Onoyama, Takumi, Katoh, Hiroto, Abe, Hiroyuki, Sano, Hiroyuki, Konishi, Teppei, Kumasaka, Toshio, Yokose, Tomoyuki, Miyagi, Yohei, Ushiku, Tetsuo, Ishikawa, Shumpei
Natura: Preprint
Pubblicazione: 2025
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author Komura, Daisuke
Takao, Maki
Ochi, Mieko
Onoyama, Takumi
Katoh, Hiroto
Abe, Hiroyuki
Sano, Hiroyuki
Konishi, Teppei
Kumasaka, Toshio
Yokose, Tomoyuki
Miyagi, Yohei
Ushiku, Tetsuo
Ishikawa, Shumpei
author_facet Komura, Daisuke
Takao, Maki
Ochi, Mieko
Onoyama, Takumi
Katoh, Hiroto
Abe, Hiroyuki
Sano, Hiroyuki
Konishi, Teppei
Kumasaka, Toshio
Yokose, Tomoyuki
Miyagi, Yohei
Ushiku, Tetsuo
Ishikawa, Shumpei
contents The tumor microenvironment (TME) plays a crucial role in cancer progression and treatment response, yet current methods for its comprehensive analysis in H&E-stained tissue slides face significant limitations in the diversity of tissue cell types and accuracy. Here, we present PAGET (Pathological image segmentation via AGgrEgated Teachers), a new knowledge distillation approach that integrates multiple segmentation models while considering the hierarchical nature of cell types in the TME. By leveraging a unique dataset created through immunohistochemical restaining techniques and existing segmentation models, PAGET enables simultaneous identification and classification of 14 key TME components. We demonstrate PAGET's ability to perform rapid, comprehensive TME segmentation across various tissue types and medical institutions, advancing the quantitative analysis of tumor microenvironments. This method represents a significant step forward in enhancing our understanding of cancer biology and supporting precise clinical decision-making from large-scale histopathology images.
format Preprint
id arxiv_https___arxiv_org_abs_2501_02909
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Comprehensive Pathological Image Segmentation via Teacher Aggregation for Tumor Microenvironment Analysis
Komura, Daisuke
Takao, Maki
Ochi, Mieko
Onoyama, Takumi
Katoh, Hiroto
Abe, Hiroyuki
Sano, Hiroyuki
Konishi, Teppei
Kumasaka, Toshio
Yokose, Tomoyuki
Miyagi, Yohei
Ushiku, Tetsuo
Ishikawa, Shumpei
Computer Vision and Pattern Recognition
The tumor microenvironment (TME) plays a crucial role in cancer progression and treatment response, yet current methods for its comprehensive analysis in H&E-stained tissue slides face significant limitations in the diversity of tissue cell types and accuracy. Here, we present PAGET (Pathological image segmentation via AGgrEgated Teachers), a new knowledge distillation approach that integrates multiple segmentation models while considering the hierarchical nature of cell types in the TME. By leveraging a unique dataset created through immunohistochemical restaining techniques and existing segmentation models, PAGET enables simultaneous identification and classification of 14 key TME components. We demonstrate PAGET's ability to perform rapid, comprehensive TME segmentation across various tissue types and medical institutions, advancing the quantitative analysis of tumor microenvironments. This method represents a significant step forward in enhancing our understanding of cancer biology and supporting precise clinical decision-making from large-scale histopathology images.
title Comprehensive Pathological Image Segmentation via Teacher Aggregation for Tumor Microenvironment Analysis
topic Computer Vision and Pattern Recognition
url https://arxiv.org/abs/2501.02909