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Main Authors: Chen, Hongruyu, Aebersold, Helena, Puhan, Milo Alan, Serra-Burriel, Miquel
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2501.04061
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author Chen, Hongruyu
Aebersold, Helena
Puhan, Milo Alan
Serra-Burriel, Miquel
author_facet Chen, Hongruyu
Aebersold, Helena
Puhan, Milo Alan
Serra-Burriel, Miquel
contents Causal machine learning (ML) methods hold great promise for advancing precision medicine by estimating personalized treatment effects. However, their reliability remains largely unvalidated in empirical settings. In this study, we assessed the internal and external validity of 17 mainstream causal heterogeneity ML methods -- including metalearners, tree-based methods, and deep learning methods -- using data from two large randomized controlled trials: the International Stroke Trial (N=19,435) and the Chinese Acute Stroke Trial (N=21,106). Our findings reveal that none of the ML methods reliably validated their performance, neither internal nor external, showing significant discrepancies between training and test data on the proposed evaluation metrics. The individualized treatment effects estimated from training data failed to generalize to the test data, even in the absence of distribution shifts. These results raise concerns about the current applicability of causal ML models in precision medicine, and highlight the need for more robust validation techniques to ensure generalizability.
format Preprint
id arxiv_https___arxiv_org_abs_2501_04061
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Causal Machine Learning Methods for Estimating Personalised Treatment Effects -- Insights on validity from two large trials
Chen, Hongruyu
Aebersold, Helena
Puhan, Milo Alan
Serra-Burriel, Miquel
Machine Learning
Causal machine learning (ML) methods hold great promise for advancing precision medicine by estimating personalized treatment effects. However, their reliability remains largely unvalidated in empirical settings. In this study, we assessed the internal and external validity of 17 mainstream causal heterogeneity ML methods -- including metalearners, tree-based methods, and deep learning methods -- using data from two large randomized controlled trials: the International Stroke Trial (N=19,435) and the Chinese Acute Stroke Trial (N=21,106). Our findings reveal that none of the ML methods reliably validated their performance, neither internal nor external, showing significant discrepancies between training and test data on the proposed evaluation metrics. The individualized treatment effects estimated from training data failed to generalize to the test data, even in the absence of distribution shifts. These results raise concerns about the current applicability of causal ML models in precision medicine, and highlight the need for more robust validation techniques to ensure generalizability.
title Causal Machine Learning Methods for Estimating Personalised Treatment Effects -- Insights on validity from two large trials
topic Machine Learning
url https://arxiv.org/abs/2501.04061