Copertina

From trees to traits: A review of advances in PhyloG2P methods and future directions

Fuente: arXiv

Salvato in:

Dettagli Bibliografici
Autori principali:	Macdonald, Arlie R., James, Maddie E., Mitchell, Jonathan D., Holland, Barbara R.
Natura:	Preprint
Pubblicazione:	2025
Soggetti:	Populations and Evolution
Accesso online:	Acceder al recurso
Tags:	Aggiungi Tag Nessun Tag, puoi essere il primo ad aggiungerne!!

Documenti analoghi

Convergence-divergence models: Generalizations of phylogenetic trees modeling gene flow over time
di: Mitchell, Jonathan D., et al.
Pubblicazione: (2025)

PhyloFrame: A DataFrame-based Library for Fast, Flexible Phylogenetic Computation
di: Moreno, Matthew Andres, et al.
Pubblicazione: (2026)

Phylo2Vec: a vector representation for binary trees
di: Penn, Matthew J, et al.
Pubblicazione: (2023)

PhyloProfile v2: Scalable Exploration of Multilayered Phylogenetic Profiles via Dimensionality Reduction
di: Tran, Vinh, et al.
Pubblicazione: (2025)

PhyloGFN: Phylogenetic inference with generative flow networks
di: Zhou, Mingyang, et al.
Pubblicazione: (2023)

PhyloVAE: Unsupervised Learning of Phylogenetic Trees via Variational Autoencoders
di: Xie, Tianyu, et al.
Pubblicazione: (2025)

Polygenic dynamics underlying the response of quantitative traits to directional selection
di: Götsch, Hannah, et al.
Pubblicazione: (2023)

A model for a population of trees structured by phenological traits
di: Boucenna, Sirine, et al.
Pubblicazione: (2026)

PhyloGen: Language Model-Enhanced Phylogenetic Inference via Graph Structure Generation
di: Duan, ChenRui, et al.
Pubblicazione: (2024)

Streptococcosis in aquaculture: Advances, challenges, and future directions in disease control and prevention
di: Sule, Hussein Aliu, et al.
Pubblicazione: (2025)

Conformity to continuous and discrete ordinal traits
di: Mora, Elisa Heinrich, et al.
Pubblicazione: (2024)

PhyloLM : Inferring the Phylogeny of Large Language Models and Predicting their Performances in Benchmarks
di: Yax, Nicolas, et al.
Pubblicazione: (2024)

On estimating the effective sample size of phylogenetic trees in an autocorrelated chain
di: Klawitter, Jonathan, et al.
Pubblicazione: (2026)

The co-evolution of direct, indirect and generalized reciprocity
di: Pal, Saptarshi, et al.
Pubblicazione: (2024)

Fixation times on directed graphs
di: Brewster, David A., et al.
Pubblicazione: (2023)

The genetic and developmental enigma of rhizomes: crucial traits with limited understanding
di: Chen, Hongfei, et al.
Pubblicazione: (2026)

Pan-tropical plant functional trait variation from space
di: Schimel, David, et al.
Pubblicazione: (2025)

Mathematical models of Plasmodium vivax transmission: a scoping review
di: Anwar, Md Nurul, et al.
Pubblicazione: (2023)

Investigation of P. Vivax Elimination via Mass Drug Administration
di: Anwar, Md Nurul, et al.
Pubblicazione: (2024)

Heat-tree: Cross-platform software for interactive and embeddable phylogenetic tree visualization and editing
di: Foster, Zachary S. L., et al.
Pubblicazione: (2026)

Innate behavioural mechanisms and defensive traits in ecological models of predator-prey types
di: Saha, Sangeeta, et al.
Pubblicazione: (2025)

Counting rankings of tree-child networks
di: Zhang, Qiang, et al.
Pubblicazione: (2025)

Finding high posterior density phylogenies by systematically extending a directed acyclic graph
di: Jennings-Shaffer, Chris, et al.
Pubblicazione: (2024)

Understanding the genetic basis of variation in meiotic recombination: past, present, and future
di: Johnston, Susan E.
Pubblicazione: (2024)

Quantifying indirect and direct vaccination effects arising in the SIR model
di: Lin, Lixin, et al.
Pubblicazione: (2024)

Colorings of unrooted tree-based networks and related graphs
di: Wilde, Mirko, et al.
Pubblicazione: (2025)

Long-term evolution of regulatory DNA sequences. Part 2: Theory and future challenges
di: Mascolo, Elia, et al.
Pubblicazione: (2026)

Neutral phylogenetic models and their role in tree-based biodiversity measures
di: Steel, Mike
Pubblicazione: (2024)

Comparison of the effectiveness and costs of hepatitis A vaccination strategies to mitigate future deaths in the Republic of Korea
di: Lim, Yuna, et al.
Pubblicazione: (2025)

Modelling \textit{Aedes albopictus} management, incorporating immigration and bi-directional \textit{Wolbachia} interactions
di: Ryan, Matthew, et al.
Pubblicazione: (2025)

Combinatorial comparison of general galled trees, time-consistent galled trees, and simplex time-consistent galled trees
di: Agranat-Tamir, Lily, et al.
Pubblicazione: (2026)

CRP-Tree: A phylogenetic association test for binary traits
di: Zhang, Julie, et al.
Pubblicazione: (2023)

Branch length statistics in phylogenetic trees under constant-rate birth-death dynamics
di: Dieselhorst, Tobias, et al.
Pubblicazione: (2024)

Anomaly zones for uniformly sampled gene trees under the gene duplication and loss model
di: Legried, Brandon
Pubblicazione: (2023)

Counting cherry reduction sequences is counting linear extensions (in phylogenetic tree-child networks)
di: Coronado, Tomás M., et al.
Pubblicazione: (2024)

Concepts and methods for predicting viral evolution
di: Meijers, Matthijs, et al.
Pubblicazione: (2024)

Macroscopic Dominance from Microscopic Extremes: Symmetry Breaking in Spatial Competition
di: Guha, Stuti, et al.
Pubblicazione: (2026)

Fertilizers Fuel, Insecticides Stabilize: Resolving the Paradox of Enrichment in Agriculture
di: Srivastava, Vaibhava, et al.
Pubblicazione: (2025)

Adapting cluster graphs for inference of continuous trait evolution on phylogenetic networks
di: Teo, Benjamin, et al.
Pubblicazione: (2025)

Graph-based method for constructing consensus trees
di: Torquet, Elio, et al.
Pubblicazione: (2025)