Nonparametric methods controlling the median of the false discovery proportion

Fuente: arXiv
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Autor principal: Hemerik, Jesse
Formato: Preprint
Publicado: 2025
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author Hemerik, Jesse
author_facet Hemerik, Jesse
contents When testing many hypotheses, often we do not have strong expectations about the directions of the effects. In some situations however, the alternative hypotheses are that the parameters lie in a certain direction or interval, and it is in fact expected that most hypotheses are false. This is often the case when researchers perform multiple noninferiority or equivalence tests, e.g. when testing food safety with metabolite data. The goal is then to use data to corroborate the expectation that most hypotheses are false. We propose a nonparametric multiple testing approach that is powerful in such situations. If the user's expectations are wrong, our approach will still be valid but have low power. Of course all multiple testing methods become more powerful when appropriate one-sided instead of two-sided tests are used, but our approach often has superior power then. The proposed methods are not at all limited to safety testing and can be used for testing hypotheses about various kinds of parameters, such as coefficients of a model. The methods in this paper control the median of the false discovery proportion (FDP), which is the fraction of false discoveries among the rejected hypotheses. This approach is comparable to false discovery rate control, where one ensures that the mean rather than the median of the FDP is small. Our procedures make use of a symmetry property of the test statistics, do not require independence and have finite-sample properties.
format Preprint
id arxiv_https___arxiv_org_abs_2501_16985
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Nonparametric methods controlling the median of the false discovery proportion
Hemerik, Jesse
Methodology
62G10
When testing many hypotheses, often we do not have strong expectations about the directions of the effects. In some situations however, the alternative hypotheses are that the parameters lie in a certain direction or interval, and it is in fact expected that most hypotheses are false. This is often the case when researchers perform multiple noninferiority or equivalence tests, e.g. when testing food safety with metabolite data. The goal is then to use data to corroborate the expectation that most hypotheses are false. We propose a nonparametric multiple testing approach that is powerful in such situations. If the user's expectations are wrong, our approach will still be valid but have low power. Of course all multiple testing methods become more powerful when appropriate one-sided instead of two-sided tests are used, but our approach often has superior power then. The proposed methods are not at all limited to safety testing and can be used for testing hypotheses about various kinds of parameters, such as coefficients of a model. The methods in this paper control the median of the false discovery proportion (FDP), which is the fraction of false discoveries among the rejected hypotheses. This approach is comparable to false discovery rate control, where one ensures that the mean rather than the median of the FDP is small. Our procedures make use of a symmetry property of the test statistics, do not require independence and have finite-sample properties.
title Nonparametric methods controlling the median of the false discovery proportion
topic Methodology
62G10
url https://arxiv.org/abs/2501.16985