New tools for comparing classical and neural ODE models for tumor growth

Fuente: arXiv
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Autores principales: Blaom, Anthony D., Okon, Samuel
Formato: Preprint
Publicado: 2025
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author Blaom, Anthony D.
Okon, Samuel
author_facet Blaom, Anthony D.
Okon, Samuel
contents A new computational tool TumorGrowth$.$jl for modeling tumor growth is introduced. The tool allows the comparison of standard textbook models, such as General Bertalanffy and Gompertz, with some newer models, including, for the first time, neural ODE models. As an application, we revisit a human meta-study of non-small cell lung cancer and bladder cancer lesions, in patients undergoing two different treatment options, to determine if previously reported performance differences are statistically significant, and if newer, more complex models perform any better. In a population of examples with at least four time-volume measurements available for calibration, and an average of about 6.3, our main conclusion is that the General Bertalanffy model has superior performance, on average. However, where more measurements are available, we argue that more complex models, capable of capturing rebound and relapse behavior, may be better choices.
format Preprint
id arxiv_https___arxiv_org_abs_2502_07964
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle New tools for comparing classical and neural ODE models for tumor growth
Blaom, Anthony D.
Okon, Samuel
Machine Learning
Quantitative Methods
A new computational tool TumorGrowth$.$jl for modeling tumor growth is introduced. The tool allows the comparison of standard textbook models, such as General Bertalanffy and Gompertz, with some newer models, including, for the first time, neural ODE models. As an application, we revisit a human meta-study of non-small cell lung cancer and bladder cancer lesions, in patients undergoing two different treatment options, to determine if previously reported performance differences are statistically significant, and if newer, more complex models perform any better. In a population of examples with at least four time-volume measurements available for calibration, and an average of about 6.3, our main conclusion is that the General Bertalanffy model has superior performance, on average. However, where more measurements are available, we argue that more complex models, capable of capturing rebound and relapse behavior, may be better choices.
title New tools for comparing classical and neural ODE models for tumor growth
topic Machine Learning
Quantitative Methods
url https://arxiv.org/abs/2502.07964