Motion-Robust T2* Quantification from Gradient Echo MRI with Physics-Informed Deep Learning

Fuente: arXiv
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Autores principales: Eichhorn, Hannah, Spieker, Veronika, Hammernik, Kerstin, Saks, Elisa, Felsner, Lina, Weiss, Kilian, Preibisch, Christine, Schnabel, Julia A.
Formato: Preprint
Publicado: 2025
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author Eichhorn, Hannah
Spieker, Veronika
Hammernik, Kerstin
Saks, Elisa
Felsner, Lina
Weiss, Kilian
Preibisch, Christine
Schnabel, Julia A.
author_facet Eichhorn, Hannah
Spieker, Veronika
Hammernik, Kerstin
Saks, Elisa
Felsner, Lina
Weiss, Kilian
Preibisch, Christine
Schnabel, Julia A.
contents Purpose: T2* quantification from gradient echo magnetic resonance imaging is particularly affected by subject motion due to the high sensitivity to magnetic field inhomogeneities, which are influenced by motion and might cause signal loss. Thus, motion correction is crucial to obtain high-quality T2* maps. Methods: We extend our previously introduced learning-based physics-informed motion correction method, PHIMO, by utilizing acquisition knowledge to enhance the reconstruction performance for challenging motion patterns and increase PHIMO's robustness to varying strengths of magnetic field inhomogeneities across the brain. We perform comprehensive evaluations regarding motion detection accuracy and image quality for data with simulated and real motion. Results: Our extended version of PHIMO outperforms the learning-based baseline methods both qualitatively and quantitatively with respect to line detection and image quality. Moreover, PHIMO performs on-par with a conventional state-of-the-art motion correction method for T2* quantification from gradient echo MRI, which relies on redundant data acquisition. Conclusion: PHIMO's competitive motion correction performance, combined with a reduction in acquisition time by over 40% compared to the state-of-the-art method, make it a promising solution for motion-robust T2* quantification in research settings and clinical routine.
format Preprint
id arxiv_https___arxiv_org_abs_2502_17209
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Motion-Robust T2* Quantification from Gradient Echo MRI with Physics-Informed Deep Learning
Eichhorn, Hannah
Spieker, Veronika
Hammernik, Kerstin
Saks, Elisa
Felsner, Lina
Weiss, Kilian
Preibisch, Christine
Schnabel, Julia A.
Image and Video Processing
Computer Vision and Pattern Recognition
Machine Learning
Medical Physics
Purpose: T2* quantification from gradient echo magnetic resonance imaging is particularly affected by subject motion due to the high sensitivity to magnetic field inhomogeneities, which are influenced by motion and might cause signal loss. Thus, motion correction is crucial to obtain high-quality T2* maps. Methods: We extend our previously introduced learning-based physics-informed motion correction method, PHIMO, by utilizing acquisition knowledge to enhance the reconstruction performance for challenging motion patterns and increase PHIMO's robustness to varying strengths of magnetic field inhomogeneities across the brain. We perform comprehensive evaluations regarding motion detection accuracy and image quality for data with simulated and real motion. Results: Our extended version of PHIMO outperforms the learning-based baseline methods both qualitatively and quantitatively with respect to line detection and image quality. Moreover, PHIMO performs on-par with a conventional state-of-the-art motion correction method for T2* quantification from gradient echo MRI, which relies on redundant data acquisition. Conclusion: PHIMO's competitive motion correction performance, combined with a reduction in acquisition time by over 40% compared to the state-of-the-art method, make it a promising solution for motion-robust T2* quantification in research settings and clinical routine.
title Motion-Robust T2* Quantification from Gradient Echo MRI with Physics-Informed Deep Learning
topic Image and Video Processing
Computer Vision and Pattern Recognition
Machine Learning
Medical Physics
url https://arxiv.org/abs/2502.17209