RuCCoD: Towards Automated ICD Coding in Russian
Fuente:
arXiv
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| Autores principales: | , , , , , , , |
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| Formato: | Preprint |
| Publicado: |
2025
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| Acceso en línea: | |
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| _version_ | 1866914057752150016 |
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| author | Nesterov, Aleksandr Sakhovskiy, Andrey Sviridov, Ivan Valiev, Airat Makharev, Vladimir Anokhin, Petr Zubkova, Galina Tutubalina, Elena |
| author_facet | Nesterov, Aleksandr Sakhovskiy, Andrey Sviridov, Ivan Valiev, Airat Makharev, Vladimir Anokhin, Petr Zubkova, Galina Tutubalina, Elena |
| contents | This study investigates the feasibility of automating clinical coding in Russian, a language with limited biomedical resources. We present a new dataset for ICD coding, which includes diagnosis fields from electronic health records (EHRs) annotated with over 10,000 entities and more than 1,500 unique ICD codes. This dataset serves as a benchmark for several state-of-the-art models, including BERT, LLaMA with LoRA, and RAG, with additional experiments examining transfer learning across domains (from PubMed abstracts to medical diagnosis) and terminologies (from UMLS concepts to ICD codes). We then apply the best-performing model to label an in-house EHR dataset containing patient histories from 2017 to 2021. Our experiments, conducted on a carefully curated test set, demonstrate that training with the automated predicted codes leads to a significant improvement in accuracy compared to manually annotated data from physicians. We believe our findings offer valuable insights into the potential for automating clinical coding in resource-limited languages like Russian, which could enhance clinical efficiency and data accuracy in these contexts. Our code and dataset are available at https://github.com/auto-icd-coding/ruccod. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2502_21263 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | RuCCoD: Towards Automated ICD Coding in Russian Nesterov, Aleksandr Sakhovskiy, Andrey Sviridov, Ivan Valiev, Airat Makharev, Vladimir Anokhin, Petr Zubkova, Galina Tutubalina, Elena Computation and Language Artificial Intelligence Databases This study investigates the feasibility of automating clinical coding in Russian, a language with limited biomedical resources. We present a new dataset for ICD coding, which includes diagnosis fields from electronic health records (EHRs) annotated with over 10,000 entities and more than 1,500 unique ICD codes. This dataset serves as a benchmark for several state-of-the-art models, including BERT, LLaMA with LoRA, and RAG, with additional experiments examining transfer learning across domains (from PubMed abstracts to medical diagnosis) and terminologies (from UMLS concepts to ICD codes). We then apply the best-performing model to label an in-house EHR dataset containing patient histories from 2017 to 2021. Our experiments, conducted on a carefully curated test set, demonstrate that training with the automated predicted codes leads to a significant improvement in accuracy compared to manually annotated data from physicians. We believe our findings offer valuable insights into the potential for automating clinical coding in resource-limited languages like Russian, which could enhance clinical efficiency and data accuracy in these contexts. Our code and dataset are available at https://github.com/auto-icd-coding/ruccod. |
| title | RuCCoD: Towards Automated ICD Coding in Russian |
| topic | Computation and Language Artificial Intelligence Databases |
| url | https://arxiv.org/abs/2502.21263 |