Review GIDE -- Restaurant Review Gastrointestinal Illness Detection and Extraction with Large Language Models

Fuente: arXiv
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Autores principales: Laurence, Timothy, Harris, Joshua, Loman, Leo, Douglas, Amy, Chan, Yung-Wai, Hounsome, Luke, Larkin, Lesley, Borowitz, Michael
Formato: Preprint
Publicado: 2025
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author Laurence, Timothy
Harris, Joshua
Loman, Leo
Douglas, Amy
Chan, Yung-Wai
Hounsome, Luke
Larkin, Lesley
Borowitz, Michael
author_facet Laurence, Timothy
Harris, Joshua
Loman, Leo
Douglas, Amy
Chan, Yung-Wai
Hounsome, Luke
Larkin, Lesley
Borowitz, Michael
contents Foodborne gastrointestinal (GI) illness is a common cause of ill health in the UK. However, many cases do not interact with the healthcare system, posing significant challenges for traditional surveillance methods. The growth of publicly available online restaurant reviews and advancements in large language models (LLMs) present potential opportunities to extend disease surveillance by identifying public reports of GI illness. In this study, we introduce a novel annotation schema, developed with experts in GI illness, applied to the Yelp Open Dataset of reviews. Our annotations extend beyond binary disease detection, to include detailed extraction of information on symptoms and foods. We evaluate the performance of open-weight LLMs across these three tasks: GI illness detection, symptom extraction, and food extraction. We compare this performance to RoBERTa-based classification models fine-tuned specifically for these tasks. Our results show that using prompt-based approaches, LLMs achieve micro-F1 scores of over 90% for all three of our tasks. Using prompting alone, we achieve micro-F1 scores that exceed those of smaller fine-tuned models. We further demonstrate the robustness of LLMs in GI illness detection across three bias-focused experiments. Our results suggest that publicly available review text and LLMs offer substantial potential for public health surveillance of GI illness by enabling highly effective extraction of key information. While LLMs appear to exhibit minimal bias in processing, the inherent limitations of restaurant review data highlight the need for cautious interpretation of results.
format Preprint
id arxiv_https___arxiv_org_abs_2503_09743
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Review GIDE -- Restaurant Review Gastrointestinal Illness Detection and Extraction with Large Language Models
Laurence, Timothy
Harris, Joshua
Loman, Leo
Douglas, Amy
Chan, Yung-Wai
Hounsome, Luke
Larkin, Lesley
Borowitz, Michael
Computation and Language
Machine Learning
68T50
Foodborne gastrointestinal (GI) illness is a common cause of ill health in the UK. However, many cases do not interact with the healthcare system, posing significant challenges for traditional surveillance methods. The growth of publicly available online restaurant reviews and advancements in large language models (LLMs) present potential opportunities to extend disease surveillance by identifying public reports of GI illness. In this study, we introduce a novel annotation schema, developed with experts in GI illness, applied to the Yelp Open Dataset of reviews. Our annotations extend beyond binary disease detection, to include detailed extraction of information on symptoms and foods. We evaluate the performance of open-weight LLMs across these three tasks: GI illness detection, symptom extraction, and food extraction. We compare this performance to RoBERTa-based classification models fine-tuned specifically for these tasks. Our results show that using prompt-based approaches, LLMs achieve micro-F1 scores of over 90% for all three of our tasks. Using prompting alone, we achieve micro-F1 scores that exceed those of smaller fine-tuned models. We further demonstrate the robustness of LLMs in GI illness detection across three bias-focused experiments. Our results suggest that publicly available review text and LLMs offer substantial potential for public health surveillance of GI illness by enabling highly effective extraction of key information. While LLMs appear to exhibit minimal bias in processing, the inherent limitations of restaurant review data highlight the need for cautious interpretation of results.
title Review GIDE -- Restaurant Review Gastrointestinal Illness Detection and Extraction with Large Language Models
topic Computation and Language
Machine Learning
68T50
url https://arxiv.org/abs/2503.09743