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Main Authors: Herman, Rebecca J., Wahl, Jonas, Ninad, Urmi, Runge, Jakob
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2503.17037
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author Herman, Rebecca J.
Wahl, Jonas
Ninad, Urmi
Runge, Jakob
author_facet Herman, Rebecca J.
Wahl, Jonas
Ninad, Urmi
Runge, Jakob
contents Causal discovery aims to extract qualitative causal knowledge in the form of causal graphs from data. Because causal ground truth is rarely known in the real world, simulated data plays a vital role in evaluating the performance of the various causal discovery algorithms proposed in the literature. But recent work highlighted certain artifacts of commonly used data generation techniques for a standard class of structural causal models (SCM) that may be nonphysical, including var- and R2-sortability, where the variables' variance and coefficients of determination (R2) after regressing on all other variables, respectively, increase along the causal order. Some causal methods exploit such artifacts, leading to unrealistic expectations for their performance on real-world data. Some modifications have been proposed to remove these artifacts; notably, the internally-standardized structural causal model (iSCM) avoids varsortability and largely alleviates R2-sortability on sparse causal graphs, but exhibits a reversed R2-sortability pattern for denser graphs not featured in their work. We analyze which sortability patterns we expect to see in real data, and propose a method for drawing coefficients that we argue more effectively samples the space of SCMs. Finally, we propose a novel extension of our SCM generation method to the time series setting.
format Preprint
id arxiv_https___arxiv_org_abs_2503_17037
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Unitless Unrestricted Markov-Consistent SCM Generation: Better Benchmark Datasets for Causal Discovery
Herman, Rebecca J.
Wahl, Jonas
Ninad, Urmi
Runge, Jakob
Machine Learning
Causal discovery aims to extract qualitative causal knowledge in the form of causal graphs from data. Because causal ground truth is rarely known in the real world, simulated data plays a vital role in evaluating the performance of the various causal discovery algorithms proposed in the literature. But recent work highlighted certain artifacts of commonly used data generation techniques for a standard class of structural causal models (SCM) that may be nonphysical, including var- and R2-sortability, where the variables' variance and coefficients of determination (R2) after regressing on all other variables, respectively, increase along the causal order. Some causal methods exploit such artifacts, leading to unrealistic expectations for their performance on real-world data. Some modifications have been proposed to remove these artifacts; notably, the internally-standardized structural causal model (iSCM) avoids varsortability and largely alleviates R2-sortability on sparse causal graphs, but exhibits a reversed R2-sortability pattern for denser graphs not featured in their work. We analyze which sortability patterns we expect to see in real data, and propose a method for drawing coefficients that we argue more effectively samples the space of SCMs. Finally, we propose a novel extension of our SCM generation method to the time series setting.
title Unitless Unrestricted Markov-Consistent SCM Generation: Better Benchmark Datasets for Causal Discovery
topic Machine Learning
url https://arxiv.org/abs/2503.17037