PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences
Fuente:
arXiv
Guardado en:
| Autores principales: | Pospelova, Mariia, Safonova, Yana |
|---|---|
| Formato: | Preprint |
| Publicado: |
2025
|
| Materias: | |
| Acceso en línea: | |
| Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
Generative power of a protein language model trained on multiple sequence alignments
por: Sgarbossa, Damiano, et al.
Publicado: (2022)
por: Sgarbossa, Damiano, et al.
Publicado: (2022)
Longitudinal QSM: Enhancing consistency of multiple time point susceptibility maps via simultaneous reconstruction
por: Kim, Jiye, et al.
Publicado: (2026)
por: Kim, Jiye, et al.
Publicado: (2026)
Champuru 2: Improved scoring of alignments and a user-friendly graphical interface
por: Spöri, Yann, et al.
Publicado: (2024)
por: Spöri, Yann, et al.
Publicado: (2024)
Patch formation driven by stochastic effects of interaction between viruses and defective interfering particles
por: Liang, Qiantong, et al.
Publicado: (2023)
por: Liang, Qiantong, et al.
Publicado: (2023)
EMERALD-UI: An interactive web application to unveil novel protein biology hidden in the suboptimal-alignment space
por: Preoteasa, Andrei, et al.
Publicado: (2026)
por: Preoteasa, Andrei, et al.
Publicado: (2026)
Blini: lightweight nucleotide sequence search and dereplication
por: Lavon, Amit
Publicado: (2025)
por: Lavon, Amit
Publicado: (2025)
Fast uncovering of protein sequence diversity from structure
por: Silva, Luca Alessandro, et al.
Publicado: (2024)
por: Silva, Luca Alessandro, et al.
Publicado: (2024)
De novo peptide sequencing rescoring and FDR estimation with Winnow
por: Mabona, Amandla, et al.
Publicado: (2025)
por: Mabona, Amandla, et al.
Publicado: (2025)
Diceplot: A package for high dimensional categorical data visualization
por: Flotho, Matthias, et al.
Publicado: (2024)
por: Flotho, Matthias, et al.
Publicado: (2024)
Validation of Golden Gate assemblies using highly multiplexed Nanopore amplicon sequencing
por: Rojas, Adan A. Ramirez, et al.
Publicado: (2024)
por: Rojas, Adan A. Ramirez, et al.
Publicado: (2024)
scellop: A Scalable Redesign of Cell Population Plots for Single-Cell Data
por: Smits, Thomas C., et al.
Publicado: (2025)
por: Smits, Thomas C., et al.
Publicado: (2025)
Elastic jump propagation across a blood vessel junction
por: Spelman, Tamsin A., et al.
Publicado: (2024)
por: Spelman, Tamsin A., et al.
Publicado: (2024)
Studying self-organisation across the biosphere with process-enablement graphs
por: Brown, Emmy, et al.
Publicado: (2024)
por: Brown, Emmy, et al.
Publicado: (2024)
Module control in youth symptom networks across COVID-19
por: Fan, Tianyi, et al.
Publicado: (2026)
por: Fan, Tianyi, et al.
Publicado: (2026)
Single molecule localization microscopy challenge: a biologically inspired benchmark for long-sequence modeling
por: Valeh, Fatemeh, et al.
Publicado: (2026)
por: Valeh, Fatemeh, et al.
Publicado: (2026)
Efficient design of rna sequences with desired properties, structure, and motifs using a grammar variational autoencoder
por: Zarnaghinaghsh, Narges, et al.
Publicado: (2025)
por: Zarnaghinaghsh, Narges, et al.
Publicado: (2025)
Modeling therapy sequence for advanced cancer: A microsimulation approach leveraging Electronic Health Record data
por: Handorf, Elizabeth A., et al.
Publicado: (2024)
por: Handorf, Elizabeth A., et al.
Publicado: (2024)
Implementation of an AI-based MRD evaluation and prediction model for multiple myeloma
por: Chen, Jianfeng, et al.
Publicado: (2024)
por: Chen, Jianfeng, et al.
Publicado: (2024)
Soft Modes as a Predictive Framework for Low Dimensional Biological Systems across Scales
por: Russo, Christopher Joel, et al.
Publicado: (2024)
por: Russo, Christopher Joel, et al.
Publicado: (2024)
Integrating protein sequence embeddings with structure via graph-based deep learning for single-residue property prediction
por: Michalewicz, Kevin, et al.
Publicado: (2025)
por: Michalewicz, Kevin, et al.
Publicado: (2025)
Direct RNA sequence design under codon constraints using expressive tensor-based secondary structure models
por: Fornace, Mark, et al.
Publicado: (2026)
por: Fornace, Mark, et al.
Publicado: (2026)
PoET: A generative model of protein families as sequences-of-sequences
por: Truong Jr, Timothy F., et al.
Publicado: (2023)
por: Truong Jr, Timothy F., et al.
Publicado: (2023)
A new computational model for quantifying blood flow dynamics across myogenically-active cerebral arterial networks
por: Coccarelli, Alberto, et al.
Publicado: (2024)
por: Coccarelli, Alberto, et al.
Publicado: (2024)
Modelling birdsong transmission with methods from molecular sequence analysis
por: Kwong, Anthony, et al.
Publicado: (2025)
por: Kwong, Anthony, et al.
Publicado: (2025)
Dynamical network stability analysis of multiple biological ages provides a framework for understanding the aging process
por: Pridham, Glen, et al.
Publicado: (2023)
por: Pridham, Glen, et al.
Publicado: (2023)
Fast computation of the statistical significance test for spatio-temporal receptive field estimates obtained using spike-triggered averaging of binary pseudo-random sequences
por: Okatan, Murat
Publicado: (2024)
por: Okatan, Murat
Publicado: (2024)
Purported quantitative support for multiple introductions of SARS-CoV-2 into humans is an artefact of an imbalanced hypothesis testing framework
por: McCowan, Angus
Publicado: (2025)
por: McCowan, Angus
Publicado: (2025)
Reference standard analysis of multiple new and old plasma clearance models and renal clearance with special attention to measurement of reduced glomerular filtration rate
por: Wesolowski, Carl A.
Publicado: (2023)
por: Wesolowski, Carl A.
Publicado: (2023)
The effect of local ventilation on a spatiotemporal model of airborne disease transmission in indoor spaces
por: Pretty, Alexander, et al.
Publicado: (2023)
por: Pretty, Alexander, et al.
Publicado: (2023)
From local defects to shear-organized biofilms in tonsillar crypts via computational simulations
por: Tozzi, Arturo
Publicado: (2026)
por: Tozzi, Arturo
Publicado: (2026)
Aggregating multiple test results to improve medical decision-making
por: Böttcher, Lucas, et al.
Publicado: (2024)
por: Böttcher, Lucas, et al.
Publicado: (2024)
Predicting Progression Events in Multiple Myeloma from Routine Blood Work
por: Ferle, Maximilian, et al.
Publicado: (2024)
por: Ferle, Maximilian, et al.
Publicado: (2024)
Methylation Operation Wizard (MeOW): Identification of differentially methylated regions in long-read sequencing data
por: Zalusky, Miranda PG, et al.
Publicado: (2024)
por: Zalusky, Miranda PG, et al.
Publicado: (2024)
Clinically-aligned Multi-modal Chest X-ray Classification
por: Sloan, Phillip, et al.
Publicado: (2025)
por: Sloan, Phillip, et al.
Publicado: (2025)
Pangenome-guided sequence assembly via binary optimisation
por: Cudby, Josh, et al.
Publicado: (2025)
por: Cudby, Josh, et al.
Publicado: (2025)
SBSM-Pro: Support Bio-sequence Machine for Proteins
por: Wang, Yizheng, et al.
Publicado: (2023)
por: Wang, Yizheng, et al.
Publicado: (2023)
Density estimation for ordinal biological sequences and its applications
por: Chen, Wei-Chia, et al.
Publicado: (2024)
por: Chen, Wei-Chia, et al.
Publicado: (2024)
Reconstructing Patched or Partial Holograms to allow for Whole Slide Imaging with a Self-Referencing Holographic Microscope
por: Groult, Philip, et al.
Publicado: (2026)
por: Groult, Philip, et al.
Publicado: (2026)
Universal scale-free representations in human visual cortex
por: Gauthaman, Raj Magesh, et al.
Publicado: (2024)
por: Gauthaman, Raj Magesh, et al.
Publicado: (2024)
Canonicalization of the E value from BLAST similarity search -- dissimilarity measure and distance function for a metric space of protein sequences
por: Mao, Boryeu
Publicado: (2025)
por: Mao, Boryeu
Publicado: (2025)
Ejemplares similares
-
Generative power of a protein language model trained on multiple sequence alignments
por: Sgarbossa, Damiano, et al.
Publicado: (2022) -
Longitudinal QSM: Enhancing consistency of multiple time point susceptibility maps via simultaneous reconstruction
por: Kim, Jiye, et al.
Publicado: (2026) -
Champuru 2: Improved scoring of alignments and a user-friendly graphical interface
por: Spöri, Yann, et al.
Publicado: (2024) -
Patch formation driven by stochastic effects of interaction between viruses and defective interfering particles
por: Liang, Qiantong, et al.
Publicado: (2023) -
EMERALD-UI: An interactive web application to unveil novel protein biology hidden in the suboptimal-alignment space
por: Preoteasa, Andrei, et al.
Publicado: (2026)