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Main Authors: Chen, Ke-Jia, Mu, Wenhui, Liu, Zheng
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2504.17276
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author Chen, Ke-Jia
Mu, Wenhui
Liu, Zheng
author_facet Chen, Ke-Jia
Mu, Wenhui
Liu, Zheng
contents Recent research has witnessed the remarkable progress of Graph Neural Networks (GNNs) in the realm of graph data representation. However, GNNs still encounter the challenge of structural imbalance. Prior solutions to this problem did not take graph heterophily into account, namely that connected nodes process distinct labels or features, thus resulting in a deficiency in effectiveness. Upon verifying the impact of heterophily on solving the structural imbalance problem, we propose to rectify the heterophily first and then transfer homophilic knowledge. To the end, we devise a method named HeRB (Heterophily-Resolved Structure Balancer) for GNNs. HeRB consists of two innovative components: 1) A heterophily-lessening augmentation module which serves to reduce inter-class edges and increase intra-class edges; 2) A homophilic knowledge transfer mechanism to convey homophilic information from head nodes to tail nodes. Experimental results demonstrate that HeRB achieves superior performance on two homophilic and six heterophilic benchmark datasets, and the ablation studies further validate the efficacy of two proposed components.
format Preprint
id arxiv_https___arxiv_org_abs_2504_17276
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle HeRB: Heterophily-Resolved Structure Balancer for Graph Neural Networks
Chen, Ke-Jia
Mu, Wenhui
Liu, Zheng
Machine Learning
Recent research has witnessed the remarkable progress of Graph Neural Networks (GNNs) in the realm of graph data representation. However, GNNs still encounter the challenge of structural imbalance. Prior solutions to this problem did not take graph heterophily into account, namely that connected nodes process distinct labels or features, thus resulting in a deficiency in effectiveness. Upon verifying the impact of heterophily on solving the structural imbalance problem, we propose to rectify the heterophily first and then transfer homophilic knowledge. To the end, we devise a method named HeRB (Heterophily-Resolved Structure Balancer) for GNNs. HeRB consists of two innovative components: 1) A heterophily-lessening augmentation module which serves to reduce inter-class edges and increase intra-class edges; 2) A homophilic knowledge transfer mechanism to convey homophilic information from head nodes to tail nodes. Experimental results demonstrate that HeRB achieves superior performance on two homophilic and six heterophilic benchmark datasets, and the ablation studies further validate the efficacy of two proposed components.
title HeRB: Heterophily-Resolved Structure Balancer for Graph Neural Networks
topic Machine Learning
url https://arxiv.org/abs/2504.17276