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| Main Authors: | , , , |
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| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | https://arxiv.org/abs/2504.20818 |
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| _version_ | 1866918004413956096 |
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| author | Sagresti, Luca Benedetti, Luca Merz Jr., Kenneth M. Brancato, Giuseppe |
| author_facet | Sagresti, Luca Benedetti, Luca Merz Jr., Kenneth M. Brancato, Giuseppe |
| contents | Metal coordination is ubiquitous in Nature and central in many applications ranging from nanotechnology to catalysis and environmental chemistry. Complex formation results from the subtle interplay between different thermodynamic, kinetic, and mechanistic contributions, which remain largely elusive to standard experimental methodologies and challenging for typical modeling approaches. Here, we present an effective molecular simulation approach that can fully describe the chemical equilibrium and dynamics of metal complexes in solution, with atomistic detail. Application to Cd(II) and Ni(II) complexes with various amine ligands provides an excellent agreement with available association constants and formation rates spanning several orders of magnitude. Moreover, investigation of polydentate ligands allows unravelling the origin of the chelate effect as due to the concurrent contribution of entropy, dissociation rates, and ligand binding mechanisms. This study represents a step forward for the in silico design of coordination chemistry applications and for a better understanding of biochemical processes activated by metal binding. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2504_20818 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | Simulating metal complex formation and dynamics in aqueous solutions: Insights into stability, mechanism, and rates of ligand exchange Sagresti, Luca Benedetti, Luca Merz Jr., Kenneth M. Brancato, Giuseppe Chemical Physics Metal coordination is ubiquitous in Nature and central in many applications ranging from nanotechnology to catalysis and environmental chemistry. Complex formation results from the subtle interplay between different thermodynamic, kinetic, and mechanistic contributions, which remain largely elusive to standard experimental methodologies and challenging for typical modeling approaches. Here, we present an effective molecular simulation approach that can fully describe the chemical equilibrium and dynamics of metal complexes in solution, with atomistic detail. Application to Cd(II) and Ni(II) complexes with various amine ligands provides an excellent agreement with available association constants and formation rates spanning several orders of magnitude. Moreover, investigation of polydentate ligands allows unravelling the origin of the chelate effect as due to the concurrent contribution of entropy, dissociation rates, and ligand binding mechanisms. This study represents a step forward for the in silico design of coordination chemistry applications and for a better understanding of biochemical processes activated by metal binding. |
| title | Simulating metal complex formation and dynamics in aqueous solutions: Insights into stability, mechanism, and rates of ligand exchange |
| topic | Chemical Physics |
| url | https://arxiv.org/abs/2504.20818 |