Cover Image

Evolution of protein$-$RNA interactions

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Kolář, Michal H., Hlouchová, Klára
Format:	Preprint
Published:	2025
Subjects:	Biological Physics
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Three stages of nascent protein translocation through the ribosome exit tunnel
by: Kolář, Michal H., et al.
Published: (2024)

Sensitivity of peptide conformational dynamics in carbon nanotubes to directional mechanical forces
by: Nepomuceno, Felipe C., et al.
Published: (2024)

Computer simulations of the bacterial ribosome using a general purpose coarse-grained model MARTINI
by: Cikhart, Josef, et al.
Published: (2025)

Deciphering the chemical grammar of protein-RNA condensates
by: Grassmann, Greta, et al.
Published: (2026)

Liquid-liquid phase separation of proteins is modulated by amino acids in vitro and in vivo by regulating protein-protein interactions
by: Xu, Xufeng, et al.
Published: (2024)

Effect of coat-protein concentration on the self-assembly of bacteriophage MS2 capsids around RNA
by: Williams, LaNell A., et al.
Published: (2023)

Imaging protein interactions in vivo with sub-cellular resolution
by: Raicu, Valerica, et al.
Published: (2008)

Statistical method for analysis of interactions between chosen protein and chondroitin sulfate in an aqueous environment
by: Weber, Piotr, et al.
Published: (2022)

Target search on networks-within-networks with applications to protein-DNA interactions
by: Hedström, Lucas, et al.
Published: (2024)

Predicting the morphology of multiphase biomolecular condensates from protein interaction networks
by: Li, Tianhao, et al.
Published: (2023)

Structured Random Binding: a minimal model of protein-protein interactions
by: Zou, Ling-Nan
Published: (2025)

Predicting heteropolymer interactions: demixing and hypermixing of disordered protein sequences
by: Adachi, Kyosuke, et al.
Published: (2024)

Electrodynamic forces driving DNA-protein interactions at large distances
by: Faraji, E., et al.
Published: (2024)

Interplay of Fidelity and Diversity in the Evolution of the Genetic Code
by: Seo, Yudam, et al.
Published: (2025)

Protein-protein interaction networks can be highly sensitive to the membrane phase transition
by: Schaffner, Taylor, et al.
Published: (2025)

FRET-guided selection of RNA 3D structures
by: Weber, Mirko, et al.
Published: (2025)

Transcribing RNA polymerases: Dynamics of Twin Supercoiled Domains
by: Joyeux, Marc
Published: (2024)

The Lawnmower: an autonomous, protein-based artificial molecular motor
by: Korosec, Chapin S., et al.
Published: (2021)

Sequential binding-unbinding based specific interactions influence exchange dynamics and size distribution of protein condensates
by: Debnath, Bhanjan, et al.
Published: (2025)

Intracellular localisation and extracellular release of Y RNA and Y RNA binding proteins
by: Tom A. P. Driedonks, et al.
Published: (2024)

An exactly solvable model for RNA polymerase during the elongation stage
by: Ngoc, Ngo Phuoc Nguyen, et al.
Published: (2024)

Emergence of homochirality via template-directed ligation in an RNA reactor
by: Laurent, Gabin, et al.
Published: (2023)

MERGE-RNA: a physics-based model to predict RNA secondary structure ensembles with chemical probing
by: Sacco, Giuseppe, et al.
Published: (2025)

Uncovering hidden protein conformations with high bandwidth nanopore measurements
by: Kavetsky, Kyril, et al.
Published: (2025)

Hamiltonian model for energy condensation in classical systems: Relevance to proteins
by: Preto, Jordane, et al.
Published: (2025)

pH modulates friction memory effects in protein folding
by: Dalton, Benjamin A., et al.
Published: (2024)

Two timescales control the creation of large protein aggregates in cells
by: Miangolarra, Ander Movilla, et al.
Published: (2020)

Modeling the prion protein-mediated transport of extracellular vesicles on the neuron surface
by: Pozzi, Giulia, et al.
Published: (2025)

RNA Dynamics from Experimental and Computational Approaches
by: Bussi, Giovanni, et al.
Published: (2024)

Impact of the RNA Binding Domain Localization of the Protein Shell on Virus Particle Stability
by: Safdari, Mohammadamin, et al.
Published: (2025)

Quantum tunnelling-integrated optoplasmonic nanotrap enables conductance visualisation of individual proteins
by: Zeng, Biao-Feng, et al.
Published: (2026)

Applied causality to infer protein dynamics and kinetics
by: Aranganathan, Akashnathan, et al.
Published: (2025)

A fluorescent-protein spin qubit
by: Feder, Jacob S., et al.
Published: (2024)

Negative Wigner function by decaying interaction from equilibrium
by: Kolář, Michal, et al.
Published: (2024)

When lowering temperature, the in vivo circadian clock in cyanobacteria follows and surpasses the in vitro protein clock trough the Hopf bifurcation
by: Mihalcescu, I., et al.
Published: (2024)

Ionic transport through a protein nanopore: a Coarse-Grained Molecular Dynamics Study
by: Nathalie, Basdevant, et al.
Published: (2018)

Quasi-stationary evolution of cubic-quintic NLSE drop-like solitons in DNA-protein systems
by: Pavón-Torres, O., et al.
Published: (2024)

A Frenet frame analysis of protein geometry: hints for secondary structure assignments
by: Prados, M., et al.
Published: (2025)

Physical interactions enable energy-efficient Turing patterns
by: ter Burg, Cathelijne, et al.
Published: (2025)

Inferring three-body interactions in cell migration dynamics
by: Jouneau, Agathe, et al.
Published: (2026)