Uni-AIMS: AI-Powered Microscopy Image Analysis

Fuente: arXiv
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Auteurs principaux: Hong, Yanhui, Wang, Nan, Xia, Zhiyi, Tao, Haoyi, Fang, Xi, Li, Yiming, Wang, Jiankun, Jin, Peng, Cai, Xiaochen, Li, Shengyu, Chen, Ziqi, Zhang, Zezhong, Ke, Guolin, Zhang, Linfeng
Format: Preprint
Publié: 2025
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author Hong, Yanhui
Wang, Nan
Xia, Zhiyi
Tao, Haoyi
Fang, Xi
Li, Yiming
Wang, Jiankun
Jin, Peng
Cai, Xiaochen
Li, Shengyu
Chen, Ziqi
Zhang, Zezhong
Ke, Guolin
Zhang, Linfeng
author_facet Hong, Yanhui
Wang, Nan
Xia, Zhiyi
Tao, Haoyi
Fang, Xi
Li, Yiming
Wang, Jiankun
Jin, Peng
Cai, Xiaochen
Li, Shengyu
Chen, Ziqi
Zhang, Zezhong
Ke, Guolin
Zhang, Linfeng
contents This paper presents a systematic solution for the intelligent recognition and automatic analysis of microscopy images. We developed a data engine that generates high-quality annotated datasets through a combination of the collection of diverse microscopy images from experiments, synthetic data generation and a human-in-the-loop annotation process. To address the unique challenges of microscopy images, we propose a segmentation model capable of robustly detecting both small and large objects. The model effectively identifies and separates thousands of closely situated targets, even in cluttered visual environments. Furthermore, our solution supports the precise automatic recognition of image scale bars, an essential feature in quantitative microscopic analysis. Building upon these components, we have constructed a comprehensive intelligent analysis platform and validated its effectiveness and practicality in real-world applications. This study not only advances automatic recognition in microscopy imaging but also ensures scalability and generalizability across multiple application domains, offering a powerful tool for automated microscopic analysis in interdisciplinary research. A online application is made available for researchers to access and evaluate the proposed automated analysis service.
format Preprint
id arxiv_https___arxiv_org_abs_2505_06918
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Uni-AIMS: AI-Powered Microscopy Image Analysis
Hong, Yanhui
Wang, Nan
Xia, Zhiyi
Tao, Haoyi
Fang, Xi
Li, Yiming
Wang, Jiankun
Jin, Peng
Cai, Xiaochen
Li, Shengyu
Chen, Ziqi
Zhang, Zezhong
Ke, Guolin
Zhang, Linfeng
Image and Video Processing
Computer Vision and Pattern Recognition
Machine Learning
This paper presents a systematic solution for the intelligent recognition and automatic analysis of microscopy images. We developed a data engine that generates high-quality annotated datasets through a combination of the collection of diverse microscopy images from experiments, synthetic data generation and a human-in-the-loop annotation process. To address the unique challenges of microscopy images, we propose a segmentation model capable of robustly detecting both small and large objects. The model effectively identifies and separates thousands of closely situated targets, even in cluttered visual environments. Furthermore, our solution supports the precise automatic recognition of image scale bars, an essential feature in quantitative microscopic analysis. Building upon these components, we have constructed a comprehensive intelligent analysis platform and validated its effectiveness and practicality in real-world applications. This study not only advances automatic recognition in microscopy imaging but also ensures scalability and generalizability across multiple application domains, offering a powerful tool for automated microscopic analysis in interdisciplinary research. A online application is made available for researchers to access and evaluate the proposed automated analysis service.
title Uni-AIMS: AI-Powered Microscopy Image Analysis
topic Image and Video Processing
Computer Vision and Pattern Recognition
Machine Learning
url https://arxiv.org/abs/2505.06918