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Hauptverfasser: Huang, Jincheng, Xu, Jie, Shi, Xiaoshuang, Hu, Ping, Feng, Lei, Zhu, Xiaofeng
Format: Preprint
Veröffentlicht: 2025
Schlagworte:
Online-Zugang:https://arxiv.org/abs/2505.11335
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author Huang, Jincheng
Xu, Jie
Shi, Xiaoshuang
Hu, Ping
Feng, Lei
Zhu, Xiaofeng
author_facet Huang, Jincheng
Xu, Jie
Shi, Xiaoshuang
Hu, Ping
Feng, Lei
Zhu, Xiaofeng
contents Graph Neural Networks (GNNs) have demonstrated remarkable effectiveness on graph-based tasks. However, their predictive confidence is often miscalibrated, typically exhibiting under-confidence, which harms the reliability of their decisions. Existing calibration methods for GNNs normally introduce additional calibration components, which fail to capture the intrinsic relationship between the model and the prediction confidence, resulting in limited theoretical guarantees and increased computational overhead. To address this issue, we propose a simple yet efficient graph calibration method. We establish a unified theoretical framework revealing that model confidence is jointly governed by class-centroid-level and node-level calibration at the final layer. Based on this insight, we theoretically show that reducing the weight decay of the final-layer parameters alleviates GNN under-confidence by acting on the class-centroid level, while node-level calibration acts as a finer-grained complement to class-centroid level calibration, which encourages each test node to be closer to its predicted class centroid at the final-layer representations. Extensive experiments validate the superiority of our method.
format Preprint
id arxiv_https___arxiv_org_abs_2505_11335
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle The Final Layer Holds the Key: A Unified and Efficient GNN Calibration Framework
Huang, Jincheng
Xu, Jie
Shi, Xiaoshuang
Hu, Ping
Feng, Lei
Zhu, Xiaofeng
Machine Learning
Graph Neural Networks (GNNs) have demonstrated remarkable effectiveness on graph-based tasks. However, their predictive confidence is often miscalibrated, typically exhibiting under-confidence, which harms the reliability of their decisions. Existing calibration methods for GNNs normally introduce additional calibration components, which fail to capture the intrinsic relationship between the model and the prediction confidence, resulting in limited theoretical guarantees and increased computational overhead. To address this issue, we propose a simple yet efficient graph calibration method. We establish a unified theoretical framework revealing that model confidence is jointly governed by class-centroid-level and node-level calibration at the final layer. Based on this insight, we theoretically show that reducing the weight decay of the final-layer parameters alleviates GNN under-confidence by acting on the class-centroid level, while node-level calibration acts as a finer-grained complement to class-centroid level calibration, which encourages each test node to be closer to its predicted class centroid at the final-layer representations. Extensive experiments validate the superiority of our method.
title The Final Layer Holds the Key: A Unified and Efficient GNN Calibration Framework
topic Machine Learning
url https://arxiv.org/abs/2505.11335