RefiDiff: Progressive Refinement Diffusion for Efficient Missing Data Imputation

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Hauptverfasser: Ahamed, Md Atik, Ye, Qiang, Cheng, Qiang
Format: Preprint
Veröffentlicht: 2025
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author Ahamed, Md Atik
Ye, Qiang
Cheng, Qiang
author_facet Ahamed, Md Atik
Ye, Qiang
Cheng, Qiang
contents Missing values in high-dimensional, mixed-type datasets pose significant challenges for data imputation, particularly under Missing Not At Random (MNAR) mechanisms. Existing methods struggle to integrate local and global data characteristics, limiting performance in MNAR and high-dimensional settings. We propose an innovative framework, RefiDiff, combining local machine learning predictions with a novel Mamba-based denoising network efficiently capturing long-range dependencies among features and samples with low computational complexity. RefiDiff bridges the predictive and generative paradigms of imputation, leveraging pre-refinement for initial warm-up imputations and post-refinement to polish results, enhancing stability and accuracy. By encoding mixed-type data into unified tokens, RefiDiff enables robust imputation without architectural or hyperparameter tuning. RefiDiff outperforms state-of-the-art (SOTA) methods across missing-value settings, demonstrating strong performance in MNAR settings and superior out-of-sample generalization. Extensive evaluations on nine real-world datasets demonstrate its robustness, scalability, and effectiveness in handling complex missingness patterns.
format Preprint
id arxiv_https___arxiv_org_abs_2505_14451
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle RefiDiff: Progressive Refinement Diffusion for Efficient Missing Data Imputation
Ahamed, Md Atik
Ye, Qiang
Cheng, Qiang
Machine Learning
Artificial Intelligence
Missing values in high-dimensional, mixed-type datasets pose significant challenges for data imputation, particularly under Missing Not At Random (MNAR) mechanisms. Existing methods struggle to integrate local and global data characteristics, limiting performance in MNAR and high-dimensional settings. We propose an innovative framework, RefiDiff, combining local machine learning predictions with a novel Mamba-based denoising network efficiently capturing long-range dependencies among features and samples with low computational complexity. RefiDiff bridges the predictive and generative paradigms of imputation, leveraging pre-refinement for initial warm-up imputations and post-refinement to polish results, enhancing stability and accuracy. By encoding mixed-type data into unified tokens, RefiDiff enables robust imputation without architectural or hyperparameter tuning. RefiDiff outperforms state-of-the-art (SOTA) methods across missing-value settings, demonstrating strong performance in MNAR settings and superior out-of-sample generalization. Extensive evaluations on nine real-world datasets demonstrate its robustness, scalability, and effectiveness in handling complex missingness patterns.
title RefiDiff: Progressive Refinement Diffusion for Efficient Missing Data Imputation
topic Machine Learning
Artificial Intelligence
url https://arxiv.org/abs/2505.14451