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Main Authors: Wang, Zehong, Liu, Zheyuan, Ma, Tianyi, Li, Jiazheng, Zhang, Zheyuan, Fu, Xingbo, Li, Yiyang, Yuan, Zhengqing, Song, Wei, Ma, Yijun, Zeng, Qingkai, Chen, Xiusi, Zhao, Jianan, Li, Jundong, Jiang, Meng, Lio, Pietro, Chawla, Nitesh, Zhang, Chuxu, Ye, Yanfang
Format: Preprint
Published: 2025
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Online Access:https://arxiv.org/abs/2505.15116
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author Wang, Zehong
Liu, Zheyuan
Ma, Tianyi
Li, Jiazheng
Zhang, Zheyuan
Fu, Xingbo
Li, Yiyang
Yuan, Zhengqing
Song, Wei
Ma, Yijun
Zeng, Qingkai
Chen, Xiusi
Zhao, Jianan
Li, Jundong
Jiang, Meng
Lio, Pietro
Chawla, Nitesh
Zhang, Chuxu
Ye, Yanfang
author_facet Wang, Zehong
Liu, Zheyuan
Ma, Tianyi
Li, Jiazheng
Zhang, Zheyuan
Fu, Xingbo
Li, Yiyang
Yuan, Zhengqing
Song, Wei
Ma, Yijun
Zeng, Qingkai
Chen, Xiusi
Zhao, Jianan
Li, Jundong
Jiang, Meng
Lio, Pietro
Chawla, Nitesh
Zhang, Chuxu
Ye, Yanfang
contents Graph-structured data pervades domains such as social networks, biological systems, knowledge graphs, and recommender systems. While foundation models have transformed natural language processing, vision, and multimodal learning through large-scale pretraining and generalization, extending these capabilities to graphs -- characterized by non-Euclidean structures and complex relational semantics -- poses unique challenges and opens new opportunities. To this end, Graph Foundation Models (GFMs) aim to bring scalable, general-purpose intelligence to structured data, enabling broad transfer across graph-centric tasks and domains. This survey provides a comprehensive overview of GFMs, unifying diverse efforts under a modular framework comprising three key components: backbone architectures, pretraining strategies, and adaptation mechanisms. We categorize GFMs by their generalization scope -- universal, task-specific, and domain-specific -- and review representative methods, key innovations, and theoretical insights within each category. Beyond methodology, we examine theoretical foundations including transferability and emergent capabilities, and highlight key challenges such as structural alignment, heterogeneity, scalability, and evaluation. Positioned at the intersection of graph learning and general-purpose AI, GFMs are poised to become foundational infrastructure for open-ended reasoning over structured data. This survey consolidates current progress and outlines future directions to guide research in this rapidly evolving field. Resources are available at https://github.com/Zehong-Wang/Awesome-Foundation-Models-on-Graphs.
format Preprint
id arxiv_https___arxiv_org_abs_2505_15116
institution arXiv
publishDate 2025
record_format arxiv
spellingShingle Graph Foundation Models: A Comprehensive Survey
Wang, Zehong
Liu, Zheyuan
Ma, Tianyi
Li, Jiazheng
Zhang, Zheyuan
Fu, Xingbo
Li, Yiyang
Yuan, Zhengqing
Song, Wei
Ma, Yijun
Zeng, Qingkai
Chen, Xiusi
Zhao, Jianan
Li, Jundong
Jiang, Meng
Lio, Pietro
Chawla, Nitesh
Zhang, Chuxu
Ye, Yanfang
Machine Learning
Artificial Intelligence
Social and Information Networks
Graph-structured data pervades domains such as social networks, biological systems, knowledge graphs, and recommender systems. While foundation models have transformed natural language processing, vision, and multimodal learning through large-scale pretraining and generalization, extending these capabilities to graphs -- characterized by non-Euclidean structures and complex relational semantics -- poses unique challenges and opens new opportunities. To this end, Graph Foundation Models (GFMs) aim to bring scalable, general-purpose intelligence to structured data, enabling broad transfer across graph-centric tasks and domains. This survey provides a comprehensive overview of GFMs, unifying diverse efforts under a modular framework comprising three key components: backbone architectures, pretraining strategies, and adaptation mechanisms. We categorize GFMs by their generalization scope -- universal, task-specific, and domain-specific -- and review representative methods, key innovations, and theoretical insights within each category. Beyond methodology, we examine theoretical foundations including transferability and emergent capabilities, and highlight key challenges such as structural alignment, heterogeneity, scalability, and evaluation. Positioned at the intersection of graph learning and general-purpose AI, GFMs are poised to become foundational infrastructure for open-ended reasoning over structured data. This survey consolidates current progress and outlines future directions to guide research in this rapidly evolving field. Resources are available at https://github.com/Zehong-Wang/Awesome-Foundation-Models-on-Graphs.
title Graph Foundation Models: A Comprehensive Survey
topic Machine Learning
Artificial Intelligence
Social and Information Networks
url https://arxiv.org/abs/2505.15116