Cover Image

Acceleration of enzymatic reaction-diffusion kinetics by intermediate state

Fuente: arXiv

Saved in:

Bibliographic Details
Main Authors:	Fukuda, Akihiro, Nakayama, Yohei, Toyabe, Shoichi
Format:	Preprint
Published:	2025
Subjects:	Biological Physics Statistical Mechanics
Online Access:	Acceder al recurso
Tags:	Add Tag No Tags, Be the first to tag this record!

Similar Items

Experimental demonstration of kinetic proofreading inherited in ligation-based information replication
by: Aoyanagi, Hiroyuki, et al.
Published: (2025)

Efficiently driving F$_1$ molecular motor in experiment by suppressing nonequilibrium variation
by: Mishima, Takahide, et al.
Published: (2025)

Asymmetric enzyme kinetics of F1-ATPase induced by rotation-assisted substrate binding
by: Nakayama, Yohei, et al.
Published: (2024)

Acceleration of enzymatic reactions due to nearby inactive binding sites
by: Katznelson, Hila, et al.
Published: (2025)

Experimentally achieving minimal dissipation via thermodynamically optimal transport
by: Oikawa, Shingo, et al.
Published: (2025)

Pattern stability in reaction-diffusion systems depends on path entropy
by: Heller, Eric R., et al.
Published: (2026)

Computing macroscopic reaction rates in reaction-diffusion systems using Monte Carlo simulations
by: Swailem, Mohamed, et al.
Published: (2024)

Poissonian cellular Potts models reveal nonequilibrium kinetics of cell sorting
by: Belousov, Roman, et al.
Published: (2023)

First passage time properties of diffusion with a broad class of stochastic diffusion coefficients
by: Uchida, Go, et al.
Published: (2025)

On the thermodynamic analogy of intracellular diffusivity fluctuations
by: Itto, Yuichi
Published: (2025)

Ergodicity shapes inference in biological reactions driven by a latent trajectory
by: de Figueiredo, Benjamin Garcia, et al.
Published: (2024)

Analog of the Carnot engine for fluctuating diffusivity in living cells
by: Itto, Yuichi
Published: (2025)

Diffusion with a broad class of stochastic diffusion coefficients
by: Uchida, Go, et al.
Published: (2023)

Self-diffusion anomalies of an odd tracer in soft-core media
by: Muzzeddu, Pietro Luigi, et al.
Published: (2024)

Diffusion-controlled reactions: an overview
by: Grebenkov, Denis S.
Published: (2023)

Inference of non-exponential kinetics through stochastic resetting
by: Blumer, Ofir, et al.
Published: (2024)

Exact moments for trapped active particles: inertial impact on steady-state properties and re-entrance
by: Patel, Manish, et al.
Published: (2024)

Static vs dynamic rough energy landscapes: Where is diffusion faster?
by: Makarov, Dmitrii E., et al.
Published: (2025)

Short-time expansion of one-dimensional Fokker-Planck equations with heterogeneous diffusion
by: Dupont, Tom, et al.
Published: (2024)

Different behaviors of diffusing diffusivity dynamics based on three different definitions of fractional Brownian motion
by: Wang, Wei, et al.
Published: (2025)

Coarse-graining nonequilibrium diffusions with Markov chains
by: Nartallo-Kaluarachchi, Ramón, et al.
Published: (2025)

Super-resolved anomalous diffusion: deciphering the joint distribution of anomalous exponent and diffusion coefficient
by: Lanoiselée, Yann, et al.
Published: (2024)

Detection of diffusion anisotropy from an individual short particle trajectory
by: Takanami, Kaito, et al.
Published: (2024)

Lineage topology, replication kinetics and cell cycle synchronization reveal regulated growth dynamics in human bone marrow stromal cell colonies
by: Allegrezza, Alessandro, et al.
Published: (2025)

Maximum likelihood estimates of diffusion coefficients from single-particle tracking experiments
by: Bullerjahn, Jakob Tómas, et al.
Published: (2020)

Change-point detection in anomalous-diffusion trajectories utilising machine-learning-based uncertainty estimates
by: Seckler, Henrik, et al.
Published: (2024)

Phase boundaries promote chemical reactions through localized fluxes
by: Shelest, Alexandra, et al.
Published: (2024)

Boosting macroscopic diffusion with local resetting
by: Alston, Henry, et al.
Published: (2024)

Julian Hirniak, an early proponent of periodic chemical reaction
by: Manz, Niklas, et al.
Published: (2024)

Subconductance states in a semimicroscopic model for a tetrameric pore
by: Ramirez-Piscina, L., et al.
Published: (2024)

Inferring intermediate states by leveraging the many-body Arrhenius law
by: Kumar, Vishwajeet, et al.
Published: (2024)

Escape from a metastable state in non-Markovian population dynamics
by: Vilk, Ohad, et al.
Published: (2024)

Thermodynamic inference in molecular motors: a Martingale approach
by: Nadal-Rosa, Adrián, et al.
Published: (2025)

Repulsive particle interactions enable selective information processing at cellular interfaces
by: Elliott, Jenna, et al.
Published: (2025)

An altruistic resource-sharing mechanism for synchronization: The energy-speed-accuracy tradeoff
by: Zhang, Dongliang, et al.
Published: (2025)

Macroscopic fluctuation-response theory and its use for gene regulatory networks
by: Aslyamov, Timur, et al.
Published: (2025)

Membrane-Associated Self-Assembly for Cellular Decision Making
by: Foley, Samuel L., et al.
Published: (2025)

Theoretical Models for Tension-Dependent DNA Looping Time
by: Laeremans, Wout, et al.
Published: (2025)

Fractional Brownian motion with mean-density interaction: a myopic self-avoiding fractional stochastic process
by: House, Jonathan, et al.
Published: (2025)

A Single--Index Theory of Optimal Branching: Murray Laws, Gilbert Networks, and Young--Herring Junctions
by: Bennett, Justin
Published: (2025)