Conformal Prediction for Uncertainty Estimation in Drug-Target Interaction Prediction
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arXiv
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| Main Authors: | Rakhshaninejad, Morteza, Jurgens, Mira, Dewolf, Nicolas, Waegeman, Willem |
|---|---|
| Format: | Preprint |
| Published: |
2025
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| Subjects: | |
| Online Access: | |
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