Computing phylogenetic invariants for time-reversible models: from TN93 to its submodels
Fuente:
arXiv
Saved in:
| Main Authors: | Casanellas, Marta, Garbett, Jennifer, Homs, Roser, Korchmaros, Annachiara, Paul, Niharika Chakrabarty |
|---|---|
| Format: | Preprint |
| Published: |
2025
|
| Subjects: | |
| Online Access: | |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
A novel algebraic approach to time-reversible evolutionary models
by: Casanellas, Marta, et al.
Published: (2023)
by: Casanellas, Marta, et al.
Published: (2023)
Phylogenetic invariants: straightforward from the general Markov to equivariant models
by: Casanellas, Marta, et al.
Published: (2023)
by: Casanellas, Marta, et al.
Published: (2023)
The Pfaffian Structure of CFN Phylogenetic Networks
by: Cummings, Joseph, et al.
Published: (2023)
by: Cummings, Joseph, et al.
Published: (2023)
Revisiting the Nowosiółka skull with RMaCzek
by: Bartoszek, Krzysztof
Published: (2024)
by: Bartoszek, Krzysztof
Published: (2024)
Methodological considerations for semialgebraic hypothesis testing with incomplete U-statistics
by: Barnhill, David, et al.
Published: (2025)
by: Barnhill, David, et al.
Published: (2025)
Beyond level-1: Identifiability of a class of galled tree-child networks
by: Allman, Elizabeth S., et al.
Published: (2025)
by: Allman, Elizabeth S., et al.
Published: (2025)
Identifying circular orders for blobs in phylogenetic networks
by: Rhodes, John A., et al.
Published: (2024)
by: Rhodes, John A., et al.
Published: (2024)
Generating heterogeneous data on gene trees
by: Garcia, Martí Cortada, et al.
Published: (2025)
by: Garcia, Martí Cortada, et al.
Published: (2025)
An Improved Inverse Method for Estimating Disease Transmission Rates in Low-Prevalence Epidemics
by: Jing, Shuanglin, et al.
Published: (2025)
by: Jing, Shuanglin, et al.
Published: (2025)
Evolution of Plastic Dispersal in Stable Environment: Local Information of Fitness Consequence
by: Liang, Wayne, et al.
Published: (2026)
by: Liang, Wayne, et al.
Published: (2026)
Local intraspecific aggregation in phytoplankton model communities: spatial scales of occurrence and implications for coexistence
by: Picoche, Coralie, et al.
Published: (2022)
by: Picoche, Coralie, et al.
Published: (2022)
Maximum Likelihood Degrees of Brownian Motion Tree Models: Star Trees and Root Invariance
by: Coons, Jane Ivy, et al.
Published: (2024)
by: Coons, Jane Ivy, et al.
Published: (2024)
Modeling tumor cell heterogeneity and plasticity in adaptive therapy
by: Yue, Rui, et al.
Published: (2026)
by: Yue, Rui, et al.
Published: (2026)
Convergence of reputations under indirect reciprocity
by: Morsky, Bryce, et al.
Published: (2024)
by: Morsky, Bryce, et al.
Published: (2024)
Gonosomic algebras: an extension of gonosomal algebras
by: Varro, Richard
Published: (2025)
by: Varro, Richard
Published: (2025)
Toric Multivariate Gaussian Models from Symmetries in a Tree
by: Cardwell, Emma, et al.
Published: (2024)
by: Cardwell, Emma, et al.
Published: (2024)
Petri nets in epidemiology
by: Segovia, Carlos
Published: (2022)
by: Segovia, Carlos
Published: (2022)
Computing algebraic degrees of phylogenetic varieties
by: Puente, Luis David Garcia, et al.
Published: (2022)
by: Puente, Luis David Garcia, et al.
Published: (2022)
Routing functions for parameter space decomposition to describe stability landscapes of ecological models
by: Cummings, Joseph, et al.
Published: (2025)
by: Cummings, Joseph, et al.
Published: (2025)
Persistence and extinction dynamics in a stochastic predator-prey model with emergent Allee effects
by: Granados, Carlos, et al.
Published: (2025)
by: Granados, Carlos, et al.
Published: (2025)
A discussion of bisexual populations with Wolbachia infection as an evolution algebra
by: Esin, Songül, et al.
Published: (2023)
by: Esin, Songül, et al.
Published: (2023)
Configurations in the Euclidean space related to the 3D genome reconstruction problem from partially phased data
by: Korchmaros, Annachiara
Published: (2024)
by: Korchmaros, Annachiara
Published: (2024)
Ecological interactions and spatial dynamics in microbial aggregates: A novel modelling framework
by: Freingruber, Viktoria, et al.
Published: (2025)
by: Freingruber, Viktoria, et al.
Published: (2025)
Social \textit{vs.} individual age-dependent costs of imperfect vaccination
by: Chalub, Fabio A. C. C., et al.
Published: (2023)
by: Chalub, Fabio A. C. C., et al.
Published: (2023)
Invariants for level-1 phylogenetic networks under the random walk 4-state Markov model
by: Frohn, M., et al.
Published: (2024)
by: Frohn, M., et al.
Published: (2024)
Towards a unified framework for multiple stable states in ecological systems
by: Paige, Jennifer, et al.
Published: (2026)
by: Paige, Jennifer, et al.
Published: (2026)
Revisiting the exclusion principle in epidemiology at its ultimate limit
by: Gavish, Nir
Published: (2024)
by: Gavish, Nir
Published: (2024)
Two waves of adaptation: speciation induced by dormancy in a model with changing environment
by: Cordero, Fernando, et al.
Published: (2024)
by: Cordero, Fernando, et al.
Published: (2024)
Individual based SIS models on (not so) dense large random networks
by: Delmas, Jean-François, et al.
Published: (2023)
by: Delmas, Jean-François, et al.
Published: (2023)
How many outbreaks before an epidemic?
by: Rapallo, Fabio, et al.
Published: (2025)
by: Rapallo, Fabio, et al.
Published: (2025)
Cost-benefit analysis of ecosystem modelling to support fisheries management
by: Holden, Matthew H., et al.
Published: (2024)
by: Holden, Matthew H., et al.
Published: (2024)
The Impact of Egg Quiescence on the Efficacy of Wolbachia-Infected Mosquito Releases for Arbovirus Control
by: Lopes, Luís E. S., et al.
Published: (2024)
by: Lopes, Luís E. S., et al.
Published: (2024)
M-SDT: A modelling framework for dengue transmission, forecasting, and intervention strategies in Ahmedabad Municipal Corporation
by: Roy, Sourav, et al.
Published: (2026)
by: Roy, Sourav, et al.
Published: (2026)
Inferring birth versus death dynamics for ecological interactions in stochastic heterogeneous populations
by: Beckman, Erin, et al.
Published: (2024)
by: Beckman, Erin, et al.
Published: (2024)
Incentives for self-isolation based on incidence rather than prevalence could help to flatten the curve: a modelling study
by: de Meijere, Giulia, et al.
Published: (2025)
by: de Meijere, Giulia, et al.
Published: (2025)
Multi-scale species richness estimation with deep learning
by: Boussange, Victor, et al.
Published: (2025)
by: Boussange, Victor, et al.
Published: (2025)
A model for cholera with infectiousness of deceased individuals and vaccination
by: Abdramane, Annour Saad, et al.
Published: (2025)
by: Abdramane, Annour Saad, et al.
Published: (2025)
Zig-zag sampling for discrete structures and non-reversible phylogenetic MCMC
by: Koskela, Jere
Published: (2020)
by: Koskela, Jere
Published: (2020)
Out-of-equlibrium inference of feeding rates through population data from generic consumer-resource stochastic dynamics
by: Capitan, Jose A., et al.
Published: (2024)
by: Capitan, Jose A., et al.
Published: (2024)
Weak Form Learning for Mean-Field Partial Differential Equations: an Application to Insect Movement
by: Minor, Seth, et al.
Published: (2025)
by: Minor, Seth, et al.
Published: (2025)
Similar Items
-
A novel algebraic approach to time-reversible evolutionary models
by: Casanellas, Marta, et al.
Published: (2023) -
Phylogenetic invariants: straightforward from the general Markov to equivariant models
by: Casanellas, Marta, et al.
Published: (2023) -
The Pfaffian Structure of CFN Phylogenetic Networks
by: Cummings, Joseph, et al.
Published: (2023) -
Revisiting the Nowosiółka skull with RMaCzek
by: Bartoszek, Krzysztof
Published: (2024) -
Methodological considerations for semialgebraic hypothesis testing with incomplete U-statistics
by: Barnhill, David, et al.
Published: (2025)