Integrating computational detection and experimental validation for rapid GFRAL-specific antibody discovery
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arXiv
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| Main Authors: | , , , , , , , |
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| Format: | Preprint |
| Published: |
2025
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| _version_ | 1866908390951747584 |
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| author | Abbate, Maria Francesca Toxe, Pierre Maestrali, Nicolas Gagnaire, Marie Vigne, Emmanuelle Shahsavarian, Melody A. Mora, Thierry Walczak, Aleksandra M. |
| author_facet | Abbate, Maria Francesca Toxe, Pierre Maestrali, Nicolas Gagnaire, Marie Vigne, Emmanuelle Shahsavarian, Melody A. Mora, Thierry Walczak, Aleksandra M. |
| contents | The identification and validation of therapeutic antibodies is critical for developing effective treatments for many diseases. We present a computational approach for identifying antibodies targeting GFRAL-specific receptors, receptors implicated in appetite regulation. Using humanized Trianni mice, we conducted a longitudinal study with repeated blood sampling and splenic analysis. We applied the STAR computational method for antibody discovery on bulk antibody repertoire data sampled at key time points. By mapping the output from STAR to single-cell data taken at the last time point, we successfully identified a pool of antibodies, of which 50% demonstrated binding capabilities. We observed convergent selection, where responding sequences with identical amino acid complementarity determining regions 3 (CDR3) were found in different mice. We provide a catalog of 67 experimentally validated antibodies against GFRAL. The potential of these antibodies as antagonists or agonists against GFRAL suggests therapeutic solutions for conditions like cancer cachexia, anorexia, obesity, and diabetes. This study underscores the utility of integrating computational methods and experimental validation for antibody discovery in therapeutic contexts by reducing time and increasing efficiency. |
| format | Preprint |
| id |
arxiv_https___arxiv_org_abs_2506_01995 |
| institution | arXiv |
| publishDate | 2025 |
| record_format | arxiv |
| spellingShingle | Integrating computational detection and experimental validation for rapid GFRAL-specific antibody discovery Abbate, Maria Francesca Toxe, Pierre Maestrali, Nicolas Gagnaire, Marie Vigne, Emmanuelle Shahsavarian, Melody A. Mora, Thierry Walczak, Aleksandra M. Tissues and Organs The identification and validation of therapeutic antibodies is critical for developing effective treatments for many diseases. We present a computational approach for identifying antibodies targeting GFRAL-specific receptors, receptors implicated in appetite regulation. Using humanized Trianni mice, we conducted a longitudinal study with repeated blood sampling and splenic analysis. We applied the STAR computational method for antibody discovery on bulk antibody repertoire data sampled at key time points. By mapping the output from STAR to single-cell data taken at the last time point, we successfully identified a pool of antibodies, of which 50% demonstrated binding capabilities. We observed convergent selection, where responding sequences with identical amino acid complementarity determining regions 3 (CDR3) were found in different mice. We provide a catalog of 67 experimentally validated antibodies against GFRAL. The potential of these antibodies as antagonists or agonists against GFRAL suggests therapeutic solutions for conditions like cancer cachexia, anorexia, obesity, and diabetes. This study underscores the utility of integrating computational methods and experimental validation for antibody discovery in therapeutic contexts by reducing time and increasing efficiency. |
| title | Integrating computational detection and experimental validation for rapid GFRAL-specific antibody discovery |
| topic | Tissues and Organs |
| url | https://arxiv.org/abs/2506.01995 |